RNA id: TCONS_00071000


Basic Information

Item Value
RNA id TCONS_00071000
length 252
RNA type mRNA
GC content 0.24
exon number 13
gene id XLOC_036328
representative True

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 16742091 ~ 16788626 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gctttaataaatataTGTGTATcttatgtttatatgtatgtatatattttctACTCAAGCTTGGGCCCCAgttttcaaAGATTTTTACgttgggCATTCCATCTCACTGCTGGAGtaatgattcaatttgtcctttatacatacaatatttcccaaatgctgtttaacaaaaattgtcctgaaaaatatccaatatatatatatatatatatatatatatatatgtatatatatttatatttatatttaaat

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000191652

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00072434 lncRNA downstream 128428 16609622 ~ 16613663 (-) False XLOC_036322
TCONS_00072433 lncRNA downstream 128461 16609622 ~ 16613630 (-) False XLOC_036322
TCONS_00072432 lncRNA downstream 128462 16609622 ~ 16613629 (-) False XLOC_036322
TCONS_00072015 lncRNA downstream 128474 16609622 ~ 16613617 (-) False XLOC_036322
TCONS_00072020 lncRNA upstream 870971 17659597 ~ 17661194 (-) False XLOC_036335
TCONS_00071009 lncRNA upstream 871559 17660185 ~ 17661172 (-) True XLOC_036335
TCONS_00072021 lncRNA upstream 989234 17777860 ~ 17782923 (-) False XLOC_036336
TCONS_00071010 lncRNA upstream 989234 17777860 ~ 17784911 (-) False XLOC_036336
TCONS_00072435 lncRNA upstream 993831 17782457 ~ 17784706 (-) True XLOC_036336
TCONS_00070999 mRNA downstream 3887 16732834 ~ 16738204 (-) True XLOC_036327
TCONS_00070997 mRNA downstream 16132 16710634 ~ 16725959 (-) False XLOC_036326
TCONS_00070998 mRNA downstream 16518 16712816 ~ 16725573 (-) True XLOC_036326
TCONS_00070994 mRNA downstream 29836 16702106 ~ 16712255 (-) False XLOC_036326
TCONS_00070995 mRNA downstream 29980 16702141 ~ 16712111 (-) False XLOC_036326
TCONS_00071001 mRNA upstream 266666 17055292 ~ 17067364 (-) False XLOC_036329
TCONS_00071002 mRNA upstream 266667 17055293 ~ 17064243 (-) True XLOC_036329
TCONS_00071003 mRNA upstream 374868 17163494 ~ 17167819 (-) False XLOC_036330
TCONS_00071004 mRNA upstream 374868 17163494 ~ 17167830 (-) True XLOC_036330
TCONS_00071005 mRNA upstream 386170 17174796 ~ 17184482 (-) True XLOC_036331
TCONS_00070990 other downstream 76445 16639131 ~ 16665646 (-) False XLOC_036324
TCONS_00070989 other downstream 85005 16632735 ~ 16657086 (-) False XLOC_036324
TCONS_00070985 other downstream 128982 16613029 ~ 16613109 (-) True XLOC_036322
TCONS_00070984 other downstream 129210 16612808 ~ 16612881 (-) False XLOC_036322
TCONS_00070983 other downstream 130074 16611935 ~ 16612017 (-) True XLOC_036323
TCONS_00071006 other upstream 463613 17252239 ~ 17252354 (-) True XLOC_036332
TCONS_00071054 other upstream 1726414 18515040 ~ 18519121 (-) False XLOC_036353
TCONS_00071060 other upstream 1734455 18523081 ~ 18537866 (-) False XLOC_036353
TCONS_00071065 other upstream 1796067 18584693 ~ 18584807 (-) True XLOC_036355
TCONS_00071074 other upstream 2426099 19214725 ~ 19215684 (-) False XLOC_036363