RNA id: TCONS_00071169


Basic Information

Item Value
RNA id TCONS_00071169
length 468
RNA type mRNA
GC content 0.41
exon number 4
gene id XLOC_036412
representative True

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 22393908 ~ 22394660 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

gctCAATTGTTCGCAGTGACTGCAGTGGTGATTTAAGCACCACATGTAAACCCTGTCCTTCAGGAACATTCATGAATGAACCAAATGGACTTCATAACTGTTTCCCTTGCAGAAACTGTGCTGAAGATCATGGACTTTATATCAAGAGTAAATGCACAACAATGCAAGACAGCATCTGTGATGTGCTTGATGATCATTACTGCATTGAGTTCTTAAATCAGCAGTGCAGTCGTGCGATAAGACACAGTGTTTGCAAAGCAGGacaagaaacaaaaacacaagGAACAAAGACCACAGATACAGTTTGTGTGGACTGCACATATGGGTTTTATTCTCCATCAGGTCTGAAATGTATCAAATGGTTAAATTGCACAGCTTTAAATGAAATGCAGACAGAAGATGGCAGCTCTGTAAAAGATGTCACATGCAGACCTACGCGGGGAAGATATGGTCTATTATGTGGTGTTA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000143086

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00071168 lncRNA downstream 50686 22341606 ~ 22343222 (-) True XLOC_036409
TCONS_00071167 lncRNA downstream 50705 22341606 ~ 22343203 (-) False XLOC_036409
TCONS_00071165 lncRNA downstream 67212 22325316 ~ 22326696 (-) True XLOC_036408
TCONS_00071161 lncRNA downstream 105882 22286534 ~ 22288026 (-) True XLOC_036407
TCONS_00071159 lncRNA downstream 106535 22284294 ~ 22287373 (-) False XLOC_036407
TCONS_00072450 lncRNA upstream 11215 22405875 ~ 22474642 (-) True XLOC_036413
TCONS_00072451 lncRNA upstream 467344 22862004 ~ 22867103 (-) True XLOC_036421
TCONS_00072452 lncRNA upstream 726853 23121513 ~ 23123787 (-) False XLOC_036425
TCONS_00072033 lncRNA upstream 740040 23134700 ~ 23136454 (-) False XLOC_036426
TCONS_00072032 lncRNA upstream 740040 23134700 ~ 23136454 (-) False XLOC_036426
TCONS_00071163 mRNA downstream 67164 22297813 ~ 22326744 (-) False XLOC_036408
TCONS_00071162 mRNA downstream 67835 22297813 ~ 22326073 (-) False XLOC_036408
TCONS_00071156 mRNA downstream 105647 22283564 ~ 22288261 (-) False XLOC_036407
TCONS_00071160 mRNA downstream 105650 22284496 ~ 22288258 (-) False XLOC_036407
TCONS_00071157 mRNA downstream 105904 22284234 ~ 22288004 (-) False XLOC_036407
TCONS_00071170 mRNA upstream 104702 22499362 ~ 22508055 (-) True XLOC_036414
TCONS_00071171 mRNA upstream 114848 22509508 ~ 22515042 (-) False XLOC_036415
TCONS_00071172 mRNA upstream 116147 22510807 ~ 22514918 (-) True XLOC_036415
TCONS_00071173 mRNA upstream 127069 22521729 ~ 22542545 (-) False XLOC_036416
TCONS_00071175 mRNA upstream 128469 22523129 ~ 22539113 (-) False XLOC_036416
TCONS_00071166 other downstream 51587 22341606 ~ 22342321 (-) False XLOC_036409
TCONS_00071164 other downstream 67205 22320847 ~ 22326703 (-) False XLOC_036408
TCONS_00071158 other downstream 106697 22284294 ~ 22287211 (-) False XLOC_036407
TCONS_00071115 other downstream 1450136 20940459 ~ 20943772 (-) True XLOC_036389
TCONS_00071108 other downstream 1549406 20842134 ~ 20844502 (-) True XLOC_036384
TCONS_00071179 other upstream 138911 22533571 ~ 22538676 (-) False XLOC_036416
TCONS_00071180 other upstream 141368 22536028 ~ 22538950 (-) True XLOC_036416
TCONS_00071192 other upstream 371796 22766456 ~ 22783222 (-) False XLOC_036419
TCONS_00071194 other upstream 450040 22844700 ~ 22845798 (-) True XLOC_036420
TCONS_00071201 other upstream 727491 23122151 ~ 23122372 (-) False XLOC_036425

Expression Profile

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