RNA id: TU286076



Basic Information


Item Value
RNA id TU286076
length 204
lncRNA type inter_gene
GC content 0.56
exon number 1
gene id G211125
representative True

Chromosome Information


Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 9918410 ~ 9918613 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggactgtgtgcatgtttttttacTAACGTGGCGCAGGAGCCCTGAGACACCGGGAGCACTTGGGCAGAGCATGCTGGTACTGAAGGCACTGTGGAGAGCAGCTCCTCGTATTGACTCCGacccttcttcttcctcctccacagaTAGTAAACCGTcagacacagcagcagcaggagagcCACGGACAGACCGACAGCCAACAGT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU286057 lncRNA downstream 17626 9868662 ~ 9900784 (-) True G211112
TU286065 lncRNA downstream 36881 9879403 ~ 9881529 (-) True G211117
TU285990 lncRNA downstream 213476 9703546 ~ 9704934 (-) True G211063
TU285961 lncRNA downstream 342380 9573137 ~ 9576030 (-) True G211036
TU285962 lncRNA downstream 342380 9573137 ~ 9576030 (-) False G211036
TU286175 lncRNA upstream 3271 9921884 ~ 9922147 (-) True G211203
TU286230 lncRNA upstream 90077 10008690 ~ 10008932 (-) True G211219
TU286214 lncRNA upstream 95285 10013898 ~ 10080626 (-) True G211213
TU286236 lncRNA upstream 163264 10081877 ~ 10082332 (-) False LOC120551239
XR_005637847.1 lncRNA upstream 163346 10081959 ~ 10082734 (-) True LOC120551239
XM_039788376.1 mRNA downstream 928 9913442 ~ 9917482 (-) True LOC120551164
XM_039788378.1 mRNA downstream 6617 9907938 ~ 9911793 (-) True zgc:112285
XM_039788730.1 mRNA downstream 50795 9858082 ~ 9867615 (-) False bicral
XM_039788732.1 mRNA downstream 50829 9858082 ~ 9867581 (-) False bicral
XM_039788731.1 mRNA downstream 50853 9858082 ~ 9867557 (-) False bicral
XM_039788483.1 mRNA upstream 30257 9948870 ~ 9957260 (-) False lrrc59
XM_039788482.1 mRNA upstream 30257 9948870 ~ 9957260 (-) True lrrc59
XM_039788463.1 mRNA upstream 56082 9974695 ~ 9995625 (-) True LOC120551213
XM_039788462.1 mRNA upstream 79251 9997864 ~ 10007609 (-) True LOC120551212
XM_039788465.1 mRNA upstream 102778 10021391 ~ 10028848 (-) True LOC120551215
TU286058 other downstream 23997 9887314 ~ 9894413 (-) True G211113
TU285814 other downstream 1325346 8589241 ~ 8593064 (-) True G210928
TU285754 other downstream 1633679 8282960 ~ 8284731 (-) False LOC120551255
TU285591 other downstream 1856160 8059323 ~ 8062250 (-) True G210761
unassigned_transcript_1161 other downstream 1955872 7962467 ~ 7962538 (-) True trnac-gca_33
XR_005637844.1 other upstream 251101 10169714 ~ 10171185 (-) True LOC120551227
TU286556 other upstream 408054 10326667 ~ 10329408 (-) True G211451
unassigned_transcript_1163 other upstream 423904 10342517 ~ 10342598 (-) True trnal-uag_19
unassigned_transcript_1165 other upstream 938129 10856742 ~ 10856835 (-) True trnai-uau_4
XR_005637842.1 other upstream 946482 10865095 ~ 10891987 (-) False mta3

Expression Profile