RNA id: TU286175



Basic Information


Item Value
RNA id TU286175
length 264
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G211203
representative True

Chromosome Information


Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 9921884 ~ 9922147 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CAAGGATCTAGTTCTAAGCTATGGCCTAAAGGTGCTTCCGAGGACTGTGTATCTGATATTTCTGCCCCTTCAAAACAAGGTTCTGGTTTCCTGTGTGTTACAAGGATTCTGAATTTGGATAAATCATtgaagttattgttattgttgttccTGTTTGTATAATCCACAAATTCCTGATTCAGTTCCTTTATTGCAaatgttgattttattatgtCAAACACTGTGTATatattcattgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU286076 lncRNA downstream 3271 9918410 ~ 9918613 (-) True G211125
TU286057 lncRNA downstream 21100 9868662 ~ 9900784 (-) True G211112
TU286065 lncRNA downstream 40355 9879403 ~ 9881529 (-) True G211117
TU285990 lncRNA downstream 216950 9703546 ~ 9704934 (-) True G211063
TU285961 lncRNA downstream 345854 9573137 ~ 9576030 (-) True G211036
TU286230 lncRNA upstream 86543 10008690 ~ 10008932 (-) True G211219
TU286214 lncRNA upstream 91751 10013898 ~ 10080626 (-) True G211213
TU286236 lncRNA upstream 159730 10081877 ~ 10082332 (-) False LOC120551239
XR_005637847.1 lncRNA upstream 159812 10081959 ~ 10082734 (-) True LOC120551239
TU286237 lncRNA upstream 161400 10083547 ~ 10083816 (-) True G211225
XM_039788376.1 mRNA downstream 4402 9913442 ~ 9917482 (-) True LOC120551164
XM_039788378.1 mRNA downstream 10091 9907938 ~ 9911793 (-) True zgc:112285
XM_039788732.1 mRNA downstream 54303 9858082 ~ 9867581 (-) False bicral
XM_039788483.1 mRNA upstream 26723 9948870 ~ 9957260 (-) False lrrc59
XM_039788482.1 mRNA upstream 26723 9948870 ~ 9957260 (-) True lrrc59
XM_039788463.1 mRNA upstream 52548 9974695 ~ 9995625 (-) True LOC120551213
XM_039788462.1 mRNA upstream 75717 9997864 ~ 10007609 (-) True LOC120551212
XM_039788465.1 mRNA upstream 99244 10021391 ~ 10028848 (-) True LOC120551215
TU286058 other downstream 27471 9887314 ~ 9894413 (-) True G211113
TU285814 other downstream 1328820 8589241 ~ 8593064 (-) True G210928
TU285754 other downstream 1637153 8282960 ~ 8284731 (-) False LOC120551255
TU285591 other downstream 1859634 8059323 ~ 8062250 (-) True G210761
unassigned_transcript_1161 other downstream 1959346 7962467 ~ 7962538 (-) True trnac-gca_33
XR_005637844.1 other upstream 247567 10169714 ~ 10171185 (-) True LOC120551227
TU286556 other upstream 404520 10326667 ~ 10329408 (-) True G211451
unassigned_transcript_1163 other upstream 420370 10342517 ~ 10342598 (-) True trnal-uag_19
unassigned_transcript_1165 other upstream 934595 10856742 ~ 10856835 (-) True trnai-uau_4
XR_005637842.1 other upstream 942948 10865095 ~ 10891987 (-) False mta3

Expression Profile