RNA id: TCONS_00073015


Basic Information

Item Value
RNA id TCONS_00073015
length 735
RNA type mRNA
GC content 0.39
exon number 2
gene id XLOC_037091
representative True

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 21819082 ~ 21824647 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

ttttagttttattcatgTCTATATTCTAAAGGCTTTTACAGAGgcttgtacatgtgtaattaaCCCGATGATATacaattcattgattcattttattttgtgaattatTGTATGGTTGATTAAAAAAGAATCCCAAAATCTTCTCTGTAAAATCTACGAACTAgtctatatttaattaaatttctaaTTGGCAtatttaaacatgacattttagaAGAATTCTTAATGCATTTGATCAACTGGCAAAATAATGGTTAATTTTTGCCCTATTCATCTGCAGGCTCTTGCCTTGAGAGTGTAAAACTGGTACTGGTTTAGTGTAGAAAagcatttatgttttaatatctTCTTTTTCACTGTATACTATTTTGAAGTGAAGTGTCATGTCTTGTCAAACACTGCCATATCTGTAGCAGGCAGTGTGAGAGAAATGGCCAGTCAGTCGATGGATATTGTAGCGAAGGCTCTGGAGCAGCAGGTGCTTCAGTCAGCACGGATGGTGGAGGAGCAGCTGGATGCTGAGCTGGAGAAGCTGGAGCGCATGGATGAAGACGAGCTGGAGCTGCTGAAGGAGAGAAGACTCGAGGCCCTTAAGAAAGCTCAGAAACAGAAGCAGGAGTGGATCTCTAAAGGGCATGGTGAATACAGAGAGATCCCAAGTGAGAAAGACTTCTTTCCAGAGGTGAAAGAAAGCAAAAGTGTGGTCTGTCATTTCTACAGAGACTCCACCTTCAG

Function

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-8569 Orthologous to human TXNDC9 (thioredoxin domain containing 9).

Ensembl:

ensembl_id ENSDART00000145431

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00073011 lncRNA upstream 17141 21802075 ~ 21802960 (+) True XLOC_037090
TCONS_00075100 lncRNA upstream 54366 21762019 ~ 21765735 (+) True XLOC_037089
TCONS_00074895 lncRNA upstream 57132 21761696 ~ 21762969 (+) False XLOC_037089
TCONS_00075099 lncRNA upstream 64191 21719774 ~ 21755910 (+) True XLOC_037087
TCONS_00075098 lncRNA upstream 87860 21719512 ~ 21732241 (+) False XLOC_037087
TCONS_00073017 lncRNA downstream 5578 21826734 ~ 21829744 (+) True XLOC_037092
TCONS_00073027 lncRNA downstream 172032 21993188 ~ 21993891 (+) True XLOC_037097
TCONS_00075101 lncRNA downstream 491577 22312733 ~ 22313617 (+) False XLOC_037104
TCONS_00075102 lncRNA downstream 491739 22312895 ~ 22313617 (+) False XLOC_037104
TCONS_00075103 lncRNA downstream 491773 22312929 ~ 22313617 (+) True XLOC_037104
TCONS_00073009 mRNA upstream 3495 21793565 ~ 21816606 (+) False XLOC_037090
TCONS_00073010 mRNA upstream 3867 21795917 ~ 21816234 (+) False XLOC_037090
TCONS_00073008 mRNA upstream 95440 21722733 ~ 21724661 (+) True XLOC_037088
TCONS_00073004 mRNA upstream 249535 21536122 ~ 21570566 (+) False XLOC_037087
TCONS_00073003 mRNA upstream 253428 21535885 ~ 21566673 (+) False XLOC_037087
TCONS_00073016 mRNA downstream 5568 21826724 ~ 21831588 (+) False XLOC_037092
TCONS_00073018 mRNA downstream 22759 21843915 ~ 21845783 (+) True XLOC_037093
TCONS_00073019 mRNA downstream 156227 21977383 ~ 21983659 (+) True XLOC_037094
TCONS_00073022 mRNA downstream 168939 21990095 ~ 21991120 (+) False XLOC_037096
TCONS_00073023 mRNA downstream 168939 21990095 ~ 21991216 (+) False XLOC_037096
TCONS_00073007 other upstream 107955 21571433 ~ 21712146 (+) False XLOC_037087
TCONS_00073005 other upstream 260316 21540853 ~ 21559785 (+) False XLOC_037087
TCONS_00072979 other upstream 593969 21214940 ~ 21226132 (+) True XLOC_037078
TCONS_00072978 other upstream 615379 21204616 ~ 21204722 (+) True XLOC_037077
TCONS_00072967 other upstream 960608 20857720 ~ 20859493 (+) False XLOC_037073
TCONS_00073020 other downstream 162953 21984109 ~ 21985996 (+) True XLOC_037095
TCONS_00073021 other downstream 168902 21990058 ~ 21991212 (+) False XLOC_037096
TCONS_00073026 other downstream 171972 21993128 ~ 21993915 (+) False XLOC_037097
TCONS_00073045 other downstream 570410 22391566 ~ 22447578 (+) False XLOC_037107
TCONS_00073048 other downstream 755789 22576945 ~ 22577059 (+) True XLOC_037108

Expression Profile

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