Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00073026 |
| length | 598 |
| RNA type | processed_transcript |
| GC content | 0.49 |
| exon number | 3 |
| gene id | XLOC_037097 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007120.7 |
| NCBI id | CM002893.2 |
| chromosome length | 56459846 |
| location | 21993092 ~ 21994057 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0002088 | lens development in camera-type eye | biological_process |
| GO:0007601 | visual perception | biological_process |
| GO:0005212 | structural constituent of eye lens | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050516-8 | Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens. Human ortholog(s) of this gene implicated in cataract; cataract 2 multiple types; cataract 39 multiple types; cataract 4 multiple types; and cataract 7. Orthologous to several human genes including CRYGA (crystallin gamma A); CRYGB (crystallin gamma B); and CRYGC (crystallin gamma C). |
| ensembl_id | ENSDART00000139189 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00073017 | lncRNA | upstream | 163384 | 21826734 ~ 21829744 (+) | True | XLOC_037092 |
| TCONS_00073011 | lncRNA | upstream | 190168 | 21802075 ~ 21802960 (+) | True | XLOC_037090 |
| TCONS_00075100 | lncRNA | upstream | 227393 | 21762019 ~ 21765735 (+) | True | XLOC_037089 |
| TCONS_00074895 | lncRNA | upstream | 230159 | 21761696 ~ 21762969 (+) | False | XLOC_037089 |
| TCONS_00075099 | lncRNA | upstream | 237218 | 21719774 ~ 21755910 (+) | True | XLOC_037087 |
| TCONS_00075101 | lncRNA | downstream | 318818 | 22312733 ~ 22313617 (+) | False | XLOC_037104 |
| TCONS_00075102 | lncRNA | downstream | 318980 | 22312895 ~ 22313617 (+) | False | XLOC_037104 |
| TCONS_00075103 | lncRNA | downstream | 319014 | 22312929 ~ 22313617 (+) | True | XLOC_037104 |
| TCONS_00073038 | lncRNA | downstream | 366047 | 22359962 ~ 22360742 (+) | True | XLOC_037106 |
| TCONS_00074896 | lncRNA | downstream | 648471 | 22642386 ~ 22642685 (+) | True | XLOC_037110 |
| TCONS_00073023 | mRNA | upstream | 1912 | 21990095 ~ 21991216 (+) | False | XLOC_037096 |
| TCONS_00073024 | mRNA | upstream | 1928 | 21990136 ~ 21991200 (+) | True | XLOC_037096 |
| TCONS_00073022 | mRNA | upstream | 2008 | 21990095 ~ 21991120 (+) | False | XLOC_037096 |
| TCONS_00073019 | mRNA | upstream | 9469 | 21977383 ~ 21983659 (+) | True | XLOC_037094 |
| TCONS_00073018 | mRNA | upstream | 147345 | 21843915 ~ 21845783 (+) | True | XLOC_037093 |
| TCONS_00073028 | mRNA | downstream | 2400 | 21996315 ~ 21997115 (+) | False | XLOC_037098 |
| TCONS_00073029 | mRNA | downstream | 2546 | 21996461 ~ 21997149 (+) | True | XLOC_037098 |
| TCONS_00073030 | mRNA | downstream | 6897 | 22000812 ~ 22001778 (+) | True | XLOC_037099 |
| TCONS_00073031 | mRNA | downstream | 10027 | 22003942 ~ 22004833 (+) | True | XLOC_037100 |
| TCONS_00073032 | mRNA | downstream | 17997 | 22011912 ~ 22012819 (+) | True | XLOC_037101 |
| TCONS_00073021 | other | upstream | 1916 | 21990058 ~ 21991212 (+) | False | XLOC_037096 |
| TCONS_00073020 | other | upstream | 7132 | 21984109 ~ 21985996 (+) | True | XLOC_037095 |
| TCONS_00073007 | other | upstream | 280982 | 21571433 ~ 21712146 (+) | False | XLOC_037087 |
| TCONS_00073005 | other | upstream | 433343 | 21540853 ~ 21559785 (+) | False | XLOC_037087 |
| TCONS_00072979 | other | upstream | 766996 | 21214940 ~ 21226132 (+) | True | XLOC_037078 |
| TCONS_00073045 | other | downstream | 397651 | 22391566 ~ 22447578 (+) | False | XLOC_037107 |
| TCONS_00073048 | other | downstream | 583030 | 22576945 ~ 22577059 (+) | True | XLOC_037108 |
| TCONS_00073057 | other | downstream | 664314 | 22658229 ~ 22662728 (+) | True | XLOC_037111 |
| TCONS_00073071 | other | downstream | 1012536 | 23006451 ~ 23006978 (+) | True | XLOC_037117 |
| TCONS_00073073 | other | downstream | 1052352 | 23046267 ~ 23046385 (+) | True | XLOC_037119 |
