Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU48832 |
| length | 1118 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 1 |
| gene id | si:dkey-245f22.3 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053115.1 |
| NCBI id | CM020912.1 |
| chromosome length | 44863486 |
| location | 7183199 ~ 7187214 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU48808 | lncRNA | upstream | 31602 | 7152803 ~ 7154495 (+) | True | G36431 |
| TU48803 | lncRNA | upstream | 37406 | 7147991 ~ 7148691 (+) | True | G36426 |
| TU48801 | lncRNA | upstream | 39047 | 7146117 ~ 7147050 (+) | True | G36424 |
| TU48787 | lncRNA | upstream | 60469 | 7124942 ~ 7125628 (+) | True | G36412 |
| TU48786 | lncRNA | upstream | 62578 | 7123300 ~ 7123519 (+) | True | G36411 |
| TU48834 | lncRNA | downstream | 4802 | 7192016 ~ 7192490 (+) | True | G36450 |
| TU48859 | lncRNA | downstream | 22782 | 7209996 ~ 7268670 (+) | True | G36458 |
| TU48862 | lncRNA | downstream | 22782 | 7209996 ~ 7268670 (+) | False | G36458 |
| TU48848 | lncRNA | downstream | 28142 | 7215356 ~ 7258950 (+) | False | G36458 |
| TU48851 | lncRNA | downstream | 28142 | 7215356 ~ 7243753 (+) | False | G36458 |
| XM_039797955.1 | mRNA | upstream | 458 | 7183199 ~ 7185639 (+) | False | si:dkey-245f22.3 |
| XM_039797957.1 | mRNA | upstream | 458 | 7183199 ~ 7185639 (+) | False | si:dkey-245f22.3 |
| XM_039797831.1 | mRNA | upstream | 95345 | 7082265 ~ 7090752 (+) | False | LOC120557474 |
| XM_039797830.1 | mRNA | upstream | 96988 | 7082265 ~ 7089109 (+) | True | LOC120557474 |
| XM_039798612.1 | mRNA | upstream | 244485 | 6882146 ~ 6941612 (+) | True | sema3fb |
| XM_039797595.1 | mRNA | downstream | 101693 | 7288907 ~ 7306343 (+) | True | hcfc1a |
| XM_039797596.1 | mRNA | downstream | 101693 | 7288907 ~ 7306343 (+) | False | hcfc1a |
| XM_039797600.1 | mRNA | downstream | 125520 | 7312734 ~ 7317082 (+) | True | gata1a |
| XM_039797604.1 | mRNA | downstream | 148252 | 7335466 ~ 7337312 (+) | True | mafbb |
| XM_039797261.1 | mRNA | downstream | 174726 | 7361940 ~ 7377650 (+) | False | si:ch211-232b12.5 |
| TU48651 | other | upstream | 547710 | 6635302 ~ 6638387 (+) | False | setmar |
| TU48489 | other | upstream | 1133328 | 6035100 ~ 6052769 (+) | False | rybpb |
| TU48469 | other | upstream | 1261697 | 5920924 ~ 5924400 (+) | True | G36156 |
| XR_005638977.1 | other | upstream | 2251933 | 4911700 ~ 4934164 (+) | True | cdk5rap1 |
| TU48863 | other | downstream | 54995 | 7242209 ~ 7258950 (+) | False | G36458 |
| TU49260 | other | downstream | 1040548 | 8227762 ~ 8228720 (+) | True | G36744 |
| unassigned_transcript_183 | other | downstream | 1429784 | 8616998 ~ 8617069 (+) | True | trnae-cuc_4 |
| unassigned_transcript_186 | other | downstream | 1454816 | 8642030 ~ 8642101 (+) | True | trnae-cuc_5 |
| unassigned_transcript_189 | other | downstream | 1523795 | 8711009 ~ 8711080 (+) | True | trnae-cuc_6 |
