RNA id: TCONS_00073766


Basic Information

Item Value
RNA id TCONS_00073766
length 7590
RNA type mRNA
GC content 0.48
exon number 25
gene id XLOC_037540
representative False

Chromosome Information

Item Value
chromosome id NC_007120.7
NCBI id CM002893.2
chromosome length 56459846
location 707086 ~ 746317 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TGCTATATTGATGAGAGACtgctacataaaaaatataaataattatcgttaACTTCCTGccgcagctgtatctcttctagcaACAGCCAAAGAAAACACACGCGTGTAGTCTCGCGTTACTTGTGTCACAGCACATCATCTCACCTCCCATTTCCGCTCTAAATTTTCACATTCCCGCCATCATCGGAAGCTCGTGGGACTCGAGCGCAGAATCTCCATCATCACAGCCGGCAAAACTCACCCGCAAACATCAAACCTCGCCCGGAGCATACGCTGATCCTCCAGCGGCCCCTCCGAGGACTCTCCCACCCTCAGTGTTTTGTGGAGGATCTTCGCCCTGATGGCCGCCGCAGTGCCCAGGCTGACCAGCGGTGGCGCTGTCCGCATCCGCATCAGGTGTGGCGAACTGGGGACCACCAAGTGGAGAGAGGGGGTAATTGAGATCCAGGAGAGAGACAACAAAATCAACCTGCTGGTCAAGTTCAACAGCGGAGGAGCTCCGAGGGTTTTTCAGCTGAGTCACAATGTGAAGAGTGTTTCGTGGTTTCAAACGCACGGGCCGAACCGCATGACACTGACTCTGAAAGACTCCTGCATCGTCATGATGGACAAGCTCAACATGCTGGTCGCCAAAAAGATGAAGGAATATCTAGAAACGGTGAAGCTTGGTAAACCTGCAGTTTTTAAGACGAACCAGGGCAGTGCTAGTTTTGGGCTGGTTCTTGGAAATCGAACAGCACAGAACGACTCAGGCCTTTCTCCGTCAGATAAACAGAGTGCTCCCAGGCGTTCCAGTCTGGACAGCAGAGAGGACAGCACCCCCCGAAAGCCCCTGGGTAGCCCAAGCCGGGTCACGTCCACACCGGCCCGCGGCAGCCTCTCGGAGATCAGGAGTGAGAAGAGGAAGAGGCTGATGAACTCTGACGGAGACCTGACGGAGGACTATCCCAAAGAGAACGACTCTTCCAGCAACAATAAGGCCATCACAGACTCCTCCAGAAAGTTCCTGCTCAGCTGCAAAGACAAGCTCAAGCAGTCGGAGGAGAACAGAGCCTCTGCTCCACACACTCCTGCTCCTCTCCAGCCCACGTCTTTCTATGGGAGCCGAACAGGGGCTAAAGACTACACGCAAACGCATTCATTTCTGGACAGGCCCAGCAGTACAGGTTCATGTCCATCAGCCAAAAGAAGCCTAGTTTTGCCCAATCACTCCACGCCCTTTAAAAAGGTTCGTCCCACGCTGGATTACGGAGGCTGGAACAAACCCAGACCCTCAGTGCTGGCCCAGCCTCAGCCTCCACTGCAAGGATTCTCCAATCTTGGGAACACGTGCTACATGAACGCCATCCTCCAGTCTCTCTTCAGCCTGCCCTCCTTTTCCAATGACCTGTTGAAGCAGGGCATCCCGTGGAAGAGGGTTCCCATTAACGCCCTTCTCAGGCGATTTGCTCATCTGCTGGCAAAGAAAGACATTTCCCCTCCAGAGGTCAAGAAAGATCTTCTGCGGCGAGTGAAGAACGCCATTTCTTCAACAGCGGAGCGATTCTCTGGATACATGCAGAACGATGCTCATGAGTTTCTGAGTCAGTGTCTGGACCAGCTGAAGGAGGATGTGGAGAAGATCAACAAGAGCTGGAAGAACGAGCCGTCGGCATGGGACGAGCCTCAGAGCACGCGGTTAGCAGACGAGGTGGACACGTCACGCATCTACACCTGTCCTGTCACTGTCAACATGGAGTTTGAGGTGCAGCACACCATCACCTGCAAAAGCTGTGGAGAGGTGGTGCTGAAGCGGGAACAGTTCAATGATCTGTCCATCGACCTGCCACGCAGGAGGAAAACCCTCCCCATGAGGTCTATACAGGACTCTCTGGATCTCTTCTTCAGGATGGAGGAAATCGAGTATTCCTGTGAAAAGTGCAGCGGAAAAGCGGCGACTGTTTCTCACAAATTTAGCAGACTTCCCAGGGTGTTGATTCTTCACCTCAAACGCTACAGCTACAACACTCAGCTCTCCTTAAACAGCAAACTGGGCCAACAAGTGCTGATCCCCAAATACCTGACGCTGCTGTCCCACTGCACAGACGCCACCCGCAGCCCGCTCAGCCTGGGCTGGAGCGCACAGAACGCCCTATCACGGACGCTAAAGATCTCGCAGTCCGTCAACTCATCAACACTGAGGAGAGCGTCCCAGAGGCCGGAGAGTTCAGGCAGTGTGCTGTGCGACTCTGACAGCGATGAGGAGCTGGTCAGAAAAGTCGCTCGCAAACATCATCCAGACGACGACAGGGCAGACGAGCAGCATCATCCTCATGCAGCAGTGGAGCAGTCGGAGTTTAATGGCCCAGATGAAGAGCCCAGCAGCAGCCCAGACACCGGCTTCGGGGACGCAGACGCACACGACCTGACGCAACATCTGGAGCTGCTGGATGCAGAGAAACAGCCCACAgATGCGCTGGAGTCTCTGGATCTCACCATGGATGAGAATAAGGAGAACCAGACGCCGGACGGGCTGCAGGGCGAGCTGGACTGGGTGCAGCAGTACAGTCTGGAGCAGGAGCGCGAGGAGCAGGAGCTGCAGCAGGCGCTCGCTCAGAGTCTGCAGGAGCagGAGGCGAGAGAGATGAGAGAAGATGATGATCTGAAGAGGGCAACTGAACTCAGCCTGCAAGAGTTTAATAACTCTCTGCCGGAGCTGCTGTGCTCTGATGAGGACTCCGGGAATGAGGACGGTCTGGATATGGAGTACAGCGAGGCGGAGGCCGAAGAGCTCAAGAAGAACGCAGAGACTGGAGAACTGCCCAACTCTTTCAGACTCATCAGTGTGGTCAGTCACATCGGCAGCAGCTCCTCTTCAGGACACTACATCAGCGACGTCTACGACATGAAGAAACAGTCCTGGTTGACATATAACGATCTGGACGTGTCGCGCACGCAGGAGTCCACAGTCCAGAGAGATCGAGACCGCAGCGGATACATCTTTTTCTACATGCACAAagatgtgtTCGAGGAGCTGTCGGAGCTGGAGAAGGCCGGAGTGAACACAGATGGAGGTCGGACGGTGCTACAGCCGCTATAAAATTCTCTCCATGTGGATCCTGAACTGAGCCGAGGGTAAACGCACACCCTCATCAGTGCTactgaagaacacacacacacacacacttctgcttcAGGCACTTTCCTCTTCTGTTTCCCCCCGTGAAGAACTGTAGACCCGCAGATATAGATGTTTCTAGAGACTCCTAAAGGTACGAACTGTTTCTGGGGGAAGCGATgggaaataaataacagaaatatgaTGAGTTTGGGTTAAAGATTTGTCCTTCGGGCTTTAATATGATGAAGTCCACTTTTTTTGGTAAACTTTTATGCATTAAGAAATATTTGATGAGTTTGTTCctgttttttctgtttgtttctcTCTTTCCAGTCCACAGATTTTAGATTTTTCCTTTCTAATCTATTGCATATAAAGGTTTATTCTTGTATATGTGGTTTGGGAGGGCGTCTGGTTTCCTGTTTGATATGCAGCTGAACATGTGGTgcaatatttttgcttttatatcTATCTATGATCTATAGCGATGACGAGAGGCTAGTGCTGGTTTATATATCCGAGGCTTTACTGATGACTCCATCactttattttactcttattttatAACAAGCGCTCTCAGTGGTATGGATGTAGCTTGTCTTTGAGGATTGTTGAACACCGACAGCCCTGCTTTCGTTTTCCTTCAGTGTGTGTATCTGGAGCTGCAGCCGTTGTGTGAAGCGTCAGCCGCTGTTATTTATTTCAGTCTACTGTACGGTGTTCTGGTTTTCGTTGTCTTCActctctttatgtgtgtgtgtgtgttttccgtTCTGCTCATCGCGTCTCTTGATtggacgagtgtgtgtgtgtgtgtatggtgtttCCGGAACAGTGCTATAAGCTCTACCCAACTGCTTAGTATTCAGTCTTTGACTTCCTTACACacgttttaaaataaactttatttagaAAACAGAAAACTCCGGCATGTTTTGTGGTTTTGATTCATCAGTAGTGCATCTCCGCAGCAAATGTCCCGCATTTATGCTCTGTGTGTGCATCATCTTTTGGTGAGCGGCTCCAGATGACTGCCTGTTAGCCTGTTGAACTCGCTGAGAATGTAGCTCTCCTTCTGCTGCATCTGCGGGAAACAGAGAACTGCAGGAGTTATTGGAGAAATCtgataatattgcaatatttaatttgtctgcgttaattattgtgatatgaatacactTTGAATAGCTGTGTAGGGAGCCTAACCAATATTCAAGTAGGGAAGCTGAAATGCAATGCAGAAAATGCTTTGCACTAAATACAATTCACTAGCTCATGATCAACTATAATCGACTATTGTGAAGAAAAACTCGATTTTTTGGATACACTGTGTAAATTCTTcatcttcattttcttgtcggcttagtccctttattaatccggggtcgccacagcggaatgaaccaccaacttatccagtgagtttttacacagcggatgcccttccagctgcaacccatctctgggaaacatccacacacacactacggacaatttagcctacccaattcacctgtaccacatgtgtttggactgtgggggaaaccgaagcaacccacgcgaacgcagggagaacatgcaaactccacacaaaaacgccaactgagccgaggatcgaaccagcgaccttcttgctgtgaggcgaacgtgctacccactgcgccactgcctcgcctgtgtaaattctgtataaataaatgcaatgaatCGTCACCTCCAGccataaaggtgacccgtactgcaACACACCATACCCCTCAGTGTAAACGAGGCATTTGTGGTATATAATATCAGAAAATAAAGATTCTAAGCTTTCATGTGCTACCATGTGTAGAGATACTGGCCCACCAAAACCTAAAAAATATCTAAGGTAACCCAATATGTAGAATACCTCCTGCTGTCTCTAGAGCAGGgctgggcaaactcggtcctggaggtccggtgtcctgcacagtttatctCTGtctctaatcaaaaacacctgcttatagatttccaGTGATCTTGAAGACTCTAATTAGCAtgtgcaggtgtgtttgattggtgttggagctgaactgtgcaggacaccggccctccaggactgagtttgcccacccctgatctagagtgtgtgtttgagaatagCACACAGACGTTCTCTAACTCTCTCCTTTCaggttttgatcctaattgtgttgttttaaatgcaaatgaggtgcTCTTTATCCTCTGGTTTACTTTTCCTGATCTTATTAGTTTCCCACAAGCCTTATgaaatgtatttactgtaaagtgtgtgtgtgtggggggggtacCTCGTTCCACTCCTCTTCAGTTTCATGTCTGTATCCCAGTAAATGACAGATGCCATGAGCCGTGACcacctgcaggacacacacacgtatgtatATCAGCAGGACTGTAAACACTGAACACACTCAGGCCATGTTCACTCTAACTTtaactttaaagcaggggtgtccaaactcggtcctggagggtcagtgtcctggagagtttagctccaaccctaatcaaacacacctgaaccagctgatcaagctcttactaggtatactagaaacctcCATGCAGATGTGTTGAAGCGAGTTGGAgataaagtcagcaggacaccgagcctccaggacagagtttggacacccctggttcaAAGCATATTTTTCCTCTCCATTTAGTCCTTCCGTCTACACTGAGATTCGAGTTTAGGAAACTAAAATGCatctttttgaaaacactgtccaAAGAGGATAAATGTGGAAAAtgattttagtcatgtgaccaatcCAGCTAACATGCTGGAGAACACTGTTGCATTAAAATGCATTAACGAGCAgtgggacaggtgtacctaataaagtggccggtgagtgcacaCATGTTTACTTTGCACACTTTAATCCTCATTTGATTTTATGAATGTCAAATCTCATCTATTTGATTTAACTGCTTGGCCTAATCCAGGGGTGTCtgtctcagtcctggagggctgctgtCCTACATAGTTCTTCCTTCACACACCTCCCTGCAAGTGTCTAGTATACCtgataagagcttgattagatagttcaggtgtgtttaattggagttagaactaaaatatgcaggacaccggccctcaagaaCCAAGTCTGGACATATCTGGCCTGAACTATATTCATTCTGTGATGTGCACATGTGCTGTCATCATTACCGTCAGCGTCTGGTGCAGATCCTGCTTGGTCTCTTTACACTGCTGCATCACGTACTCCACCCCTAAGAAGATGTCCCCTAGGTTGTACTCATCCCTCTGTAGGGCACACGGCACTTTTCCCGGCCTCAGGTCCTTCACAATGACACAAACACAAGTCATTACTGTGCTCCGGTTAGTAATGGATTATAGGGATGACCAATATAGACACTACATTCACAAAATATATCACAAGATTAATTGCTatggttgttaccatagcaactgtagaatcaccacagcagattaattgcAACAGTTGTCATGTTACtgtagcaacagtagaatcaccacaggattactattgttgttaccatggcaactgtagaatgaccacgagatcaattactatagttgttgtgttgccatagcaactgtagaatcaccacaacagattaattacaatagttgttaccatagcaactgtagaatcaccacagcagatcaatcactatagttgttaccgtagcaactgtagaatcaccacaacatattaattactatagttgttgtgttatcacagcaactgtagaatcaccacaataaattaatcactatagttgttgttaccatagcgactgtagaatcaccacaacagatcaattcctCTAATGTATAAGCACTACAGTAtcgtttattttatattatgtttaagTGTAACCACTGAGGCTGTTCTTGCTCCAGTCTGACAGCCGCGGTGTGTACCTCATAGAAGGGGAAGGACAGCACGTCTGTGGGCTGATTCCTCCGCCGGTAAGTGTGGTTGATGCGCTGGATCTTGCGGTTGTCCACGCAGATGATGCCCATGTCGAACTTCTGCACGCCGAAGATGTGTCTGAGGATCTCCACATCCCTGCGGAGCCGCGCGCGCCTCACCGGAACCACATTCTGTAGATTCCGCACAATAACACCCATCACGGACCGCACCACCGGCGGGGGGGAGGCTGACCAACACACCGGCAACACCGTCGAAACATCTAACGTTACAGGGGACACGCGGGGAAACAGCGGTCATTTCCAACACACTCGCATGATCTTCACTTTCACCCTGTTCATTGATTCGGAAAGTGATTCTGCGCATGCGCTTGAGCAAGTGAACTTAAAGGGATACACccgcggccggaagttaacgagaattgcTTGAATTGTttcttaaattgtattttattaacgtcaacTCAACCGTCACACTAATGTAAAAACTAATTATACCGAGTATTGTTCATATTATTTGTTACATTACTCATTTAATTAACGTCCT

Function

GO:

id name namespace
GO:0022900 electron transport chain biological_process
GO:0005739 mitochondrion cellular_component

KEGG:

id description
ko00190 Oxidative phosphorylation
ko04723 Retrograde endocannabinoid signaling
ko04714 Thermogenesis
ko05208 Chemical carcinogenesis - reactive oxygen species
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05014 Amyotrophic lateral sclerosis
ko05016 Huntington disease
ko05020 Prion disease
ko05022 Pathways of neurodegeneration - multiple diseases
ko05415 Diabetic cardiomyopathy
ko04932 Non-alcoholic fatty liver disease

ZFIN:

id description
ZDB-GENE-061013-802 Predicted to enable cysteine-type endopeptidase activity and thiol-dependent deubiquitinase. Acts upstream of or within central nervous system morphogenesis and cranial skeletal system development. Predicted to be active in cytosol and nucleus. Orthologous to human USP37 (ubiquitin specific peptidase 37).

Ensembl:

ensembl_id ENSDART00000130720

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00073757 lncRNA downstream 248417 461219 ~ 463221 (-) False XLOC_037537
TCONS_00075252 lncRNA downstream 273835 434375 ~ 437803 (-) True XLOC_037533
TCONS_00075251 lncRNA downstream 273839 434375 ~ 437799 (-) False XLOC_037533
TCONS_00073751 lncRNA downstream 297150 408977 ~ 414488 (-) True XLOC_037532
TCONS_00073750 lncRNA downstream 302040 407678 ~ 409598 (-) False XLOC_037532
TCONS_00075253 lncRNA upstream 11276 757593 ~ 758416 (-) True XLOC_037541
TCONS_00075254 lncRNA upstream 26546 772863 ~ 773656 (-) True XLOC_037542
TCONS_00073771 lncRNA upstream 134431 880748 ~ 889567 (-) True XLOC_037546
TCONS_00075255 lncRNA upstream 280698 1027015 ~ 1028650 (-) True XLOC_037550
TCONS_00075256 lncRNA upstream 431584 1177901 ~ 1181454 (-) True XLOC_037551
TCONS_00073763 mRNA downstream 742 707086 ~ 710896 (-) False XLOC_037540
TCONS_00073762 mRNA downstream 6971 701452 ~ 704667 (-) True XLOC_037539
TCONS_00073761 mRNA downstream 16638 584940 ~ 695000 (-) False XLOC_037538
TCONS_00073760 mRNA downstream 16638 584940 ~ 695000 (-) True XLOC_037538
TCONS_00073759 mRNA downstream 241541 467000 ~ 470097 (-) True XLOC_037537
TCONS_00073767 mRNA upstream 32428 778745 ~ 785444 (-) True XLOC_037543
TCONS_00073768 mRNA upstream 49292 795609 ~ 813693 (-) False XLOC_037544
TCONS_00073769 mRNA upstream 49399 795716 ~ 813511 (-) True XLOC_037544
TCONS_00073770 mRNA upstream 97904 844221 ~ 849069 (-) True XLOC_037545
TCONS_00073772 mRNA upstream 154075 900392 ~ 904227 (-) True XLOC_037547
TCONS_00073774 other upstream 257124 1003441 ~ 1003555 (-) True XLOC_037549
TCONS_00073777 other upstream 633059 1379376 ~ 1379490 (-) True XLOC_037555
TCONS_00073788 other upstream 898366 1644683 ~ 1644761 (-) True XLOC_037561
TCONS_00073793 other upstream 1002602 1748919 ~ 1749036 (-) True XLOC_037563
TCONS_00073794 other upstream 1185123 1931440 ~ 1934086 (-) True XLOC_037564

Expression Profile

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