RNA id: TU86929



Basic Information


Item Value
RNA id TU86929
length 269
lncRNA type inter_gene
GC content 0.42
exon number 1
gene id G64933
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26658208 ~ 26658476 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GTCTTGATGAATGCTttgttttcctctctgtctttgcTTAGTCTCCTTAAACCATCTACCTGCCGTCGTCACAGGTCTAACAGCATTCATCTCTTATACTTGGCTCAAGTGAATTTAGTTTTCTTCCCCATCTGCTTTTCTATCACAATATTTTCCTCTGCTCATTAACCTTCCACATCTGTTGTCTCACTCCTCGCACAGATTTAGTTTTGAAAGACAGGCTCCACACAATTAACTGACTCAGACTGTCGAGCAggaacaaacaacac

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
XR_005639408.1 lncRNA downstream 45191 26598493 ~ 26613017 (-) True LOC120560048
XR_005639598.1 lncRNA downstream 77393 26579879 ~ 26580815 (-) True LOC120561456
TU86841 lncRNA downstream 146862 26505845 ~ 26511346 (-) True G64859
TU86842 lncRNA downstream 146862 26505845 ~ 26511346 (-) False G64859
TU86832 lncRNA downstream 196138 26448363 ~ 26462070 (-) True G64852
TU86930 lncRNA upstream 822 26659298 ~ 26659547 (-) True G64934
TU86931 lncRNA upstream 3752 26662228 ~ 26663777 (-) True G64935
TU87031 lncRNA upstream 194316 26852792 ~ 26858716 (-) True G65015
TU87041 lncRNA upstream 214500 26872976 ~ 26874374 (-) True G65025
TU87048 lncRNA upstream 224121 26882597 ~ 26884324 (-) True G65032
XM_039804315.1 mRNA downstream 86118 26553732 ~ 26572090 (-) True ikbkb
XM_039804318.1 mRNA downstream 116470 26538070 ~ 26541738 (-) False enkd1
XM_039804316.1 mRNA downstream 116470 26538070 ~ 26541738 (-) True enkd1
XM_039804319.1 mRNA downstream 117165 26538070 ~ 26541043 (-) False enkd1
XM_039804320.1 mRNA downstream 120504 26531342 ~ 26537704 (-) True polb
XM_039802275.1 mRNA upstream 24020 26682496 ~ 26687397 (-) False snap29
XM_039802272.1 mRNA upstream 24020 26682496 ~ 26686868 (-) False snap29
XM_039802273.1 mRNA upstream 24020 26682496 ~ 26686785 (-) True snap29
XM_039802269.1 mRNA upstream 36061 26694537 ~ 26697426 (-) True serpind1
XM_039802268.1 mRNA upstream 36472 26694948 ~ 26697738 (-) False serpind1
TU86838 other downstream 143488 26469158 ~ 26514720 (-) False dynll1
TU86779 other downstream 210695 26440034 ~ 26447513 (-) True G64821
TU86476 other downstream 994838 25659575 ~ 25663370 (-) False mrps36
TU87012 other upstream 147196 26805672 ~ 26811283 (-) False LOC120560729
TU87050 other upstream 229531 26888007 ~ 26891271 (-) False sb:cb288
TU87051 other upstream 229531 26888007 ~ 26891271 (-) False sb:cb288
XR_005639600.1 other upstream 375374 27033850 ~ 27168438 (-) False arl15a
XR_005639601.1 other upstream 375433 27033909 ~ 27168438 (-) False arl15a

Expression Profile