RNA id: TU86930



Basic Information


Item Value
RNA id TU86930
length 250
lncRNA type inter_gene
GC content 0.46
exon number 1
gene id G64934
representative True

Chromosome Information


Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 26659298 ~ 26659547 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGTTTCCATGGGACAGACCACCAAAACTGCCTCCATGACCCCAGCTCCAAGCCCACACAGCAGGCCTTTGGTGCTGTCCAGTCGACCGGACTCATCCCTTGCACGGTTGCTGAGGAACTCAAACACCCCAAACCTGAGAAACAGAACAGAGCCAGCAGGGAATAATGGAAGAAGTTAACACAAAACTGCTGCAAGACAAGtaaataatcattatttttgtgagagaaaaaaacattatgtaGGGTCTTTT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU86929 lncRNA downstream 822 26658208 ~ 26658476 (-) True G64933
XR_005639408.1 lncRNA downstream 46281 26598493 ~ 26613017 (-) True LOC120560048
XR_005639598.1 lncRNA downstream 78483 26579879 ~ 26580815 (-) True LOC120561456
TU86841 lncRNA downstream 147952 26505845 ~ 26511346 (-) True G64859
TU86842 lncRNA downstream 147952 26505845 ~ 26511346 (-) False G64859
TU86931 lncRNA upstream 2681 26662228 ~ 26663777 (-) True G64935
TU87031 lncRNA upstream 193245 26852792 ~ 26858716 (-) True G65015
TU87041 lncRNA upstream 213429 26872976 ~ 26874374 (-) True G65025
TU87048 lncRNA upstream 223050 26882597 ~ 26884324 (-) True G65032
TU87060 lncRNA upstream 262854 26922401 ~ 26924669 (-) False agpat9l
XM_039804315.1 mRNA downstream 87208 26553732 ~ 26572090 (-) True ikbkb
XM_039804318.1 mRNA downstream 117560 26538070 ~ 26541738 (-) False enkd1
XM_039804316.1 mRNA downstream 117560 26538070 ~ 26541738 (-) True enkd1
XM_039804319.1 mRNA downstream 118255 26538070 ~ 26541043 (-) False enkd1
XM_039804320.1 mRNA downstream 121594 26531342 ~ 26537704 (-) True polb
XM_039802275.1 mRNA upstream 22949 26682496 ~ 26687397 (-) False snap29
XM_039802272.1 mRNA upstream 22949 26682496 ~ 26686868 (-) False snap29
XM_039802273.1 mRNA upstream 22949 26682496 ~ 26686785 (-) True snap29
XM_039802269.1 mRNA upstream 34990 26694537 ~ 26697426 (-) True serpind1
XM_039802268.1 mRNA upstream 35401 26694948 ~ 26697738 (-) False serpind1
TU86838 other downstream 144578 26469158 ~ 26514720 (-) False dynll1
TU86779 other downstream 211785 26440034 ~ 26447513 (-) True G64821
TU86476 other downstream 995928 25659575 ~ 25663370 (-) False mrps36
TU87012 other upstream 146125 26805672 ~ 26811283 (-) False LOC120560729
TU87050 other upstream 228460 26888007 ~ 26891271 (-) False sb:cb288
TU87051 other upstream 228460 26888007 ~ 26891271 (-) False sb:cb288
XR_005639600.1 other upstream 374303 27033850 ~ 27168438 (-) False arl15a
XR_005639601.1 other upstream 374362 27033909 ~ 27168438 (-) False arl15a

Expression Profile