Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU326236 |
| length | 763 |
| RNA type | TUCP |
| GC content | 0.50 |
| exon number | 4 |
| gene id | LOC117599429 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 1317936 ~ 1319549 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326234 | lncRNA | upstream | 2065 | 1310067 ~ 1315871 (+) | True | G275261 |
| XR_004579929.1 | lncRNA | upstream | 88377 | 1227864 ~ 1229559 (+) | True | LOC117599516 |
| TU326226 | lncRNA | upstream | 91422 | 1225963 ~ 1226514 (+) | False | LOC113543470 |
| XR_004579926.1 | lncRNA | upstream | 117855 | 1115768 ~ 1200081 (+) | True | LOC117599513 |
| TU326213 | lncRNA | upstream | 118748 | 1164279 ~ 1199188 (+) | True | G275244 |
| XR_004579884.1 | lncRNA | downstream | 5984 | 1325467 ~ 1326321 (+) | False | LOC117599474 |
| TU326238 | lncRNA | downstream | 6335 | 1325818 ~ 1327358 (+) | True | LOC117599474 |
| TU326243 | lncRNA | downstream | 18463 | 1337946 ~ 1340897 (+) | False | G275267 |
| TU326244 | lncRNA | downstream | 18463 | 1337946 ~ 1339578 (+) | False | G275267 |
| TU326249 | lncRNA | downstream | 93929 | 1413412 ~ 1454126 (+) | True | G275272 |
| XM_034312966.1 | mRNA | upstream | 91031 | 1018373 ~ 1226905 (+) | True | LOC113543470 |
| XM_034312961.1 | mRNA | upstream | 496770 | 814169 ~ 821166 (+) | False | LOC117599424 |
| XM_034312960.1 | mRNA | upstream | 537077 | 778955 ~ 780859 (+) | True | LOC117599423 |
| XM_034313111.1 | mRNA | upstream | 601365 | 702044 ~ 716571 (+) | True | LOC117599467 |
| XM_034312955.1 | mRNA | upstream | 981759 | 318294 ~ 336177 (+) | True | LOC117599421 |
| XM_034312973.1 | mRNA | downstream | 211941 | 1531424 ~ 1532846 (+) | True | LOC117599433 |
| XM_034312974.1 | mRNA | downstream | 995090 | 2314573 ~ 2315314 (+) | True | LOC117599434 |
| XM_034313124.1 | mRNA | downstream | 997168 | 2316651 ~ 2317780 (+) | False | LOC113543528 |
| XM_034312977.1 | mRNA | downstream | 1305919 | 2625402 ~ 2628545 (+) | True | LOC117599437 |
| XM_034312979.1 | mRNA | downstream | 1314119 | 2633602 ~ 2645389 (+) | True | LOC113525606 |
| TU326222 | other | upstream | 92238 | 1224644 ~ 1225698 (+) | False | LOC113543470 |
| XR_004579914.1 | other | upstream | 114576 | 1200071 ~ 1203360 (+) | True | LOC117599501 |
| XR_004579896.1 | other | upstream | 249358 | 1068083 ~ 1068578 (+) | True | LOC117599483 |
| TU326176 | other | upstream | 298922 | 973336 ~ 1019014 (+) | True | G275221 |
| TU326141 | other | upstream | 497211 | 818041 ~ 820725 (+) | True | LOC117599424 |
| XR_004579943.1 | other | downstream | 266 | 1319749 ~ 1322328 (+) | True | LOC117599530 |
| TU326242 | other | downstream | 18463 | 1337946 ~ 1529231 (+) | True | G275267 |
| XR_004580037.1 | other | downstream | 124974 | 1444457 ~ 1444563 (+) | True | LOC117599632 |
| TU326263 | other | downstream | 210360 | 1529843 ~ 1531055 (+) | True | G275285 |
| XR_004579892.1 | other | downstream | 217777 | 1537260 ~ 1537746 (+) | True | LOC117599479 |
