Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004580037.1 |
| length | 107 |
| RNA type | ncRNA |
| GC content | 0.49 |
| exon number | 1 |
| gene id | LOC117599632 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047612.1 |
| NCBI id | CM018558.1 |
| chromosome length | 23372418 |
| location | 1444457 ~ 1444563 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU326243 | lncRNA | upstream | 103560 | 1337946 ~ 1340897 (+) | False | G275267 |
| TU326244 | lncRNA | upstream | 104879 | 1337946 ~ 1339578 (+) | False | G275267 |
| TU326238 | lncRNA | upstream | 117099 | 1325818 ~ 1327358 (+) | True | LOC117599474 |
| XR_004579884.1 | lncRNA | upstream | 118136 | 1325467 ~ 1326321 (+) | False | LOC117599474 |
| TU326234 | lncRNA | upstream | 128586 | 1310067 ~ 1315871 (+) | True | G275261 |
| TU326257 | lncRNA | downstream | 60193 | 1504756 ~ 1506309 (+) | True | LOC117599481 |
| XR_004579894.1 | lncRNA | downstream | 60197 | 1504760 ~ 1505432 (+) | False | LOC117599481 |
| XR_004579939.1 | lncRNA | downstream | 78869 | 1523432 ~ 1528590 (+) | True | LOC117599526 |
| TU326262 | lncRNA | downstream | 85062 | 1529625 ~ 1559101 (+) | True | G275284 |
| XR_004579924.1 | lncRNA | downstream | 88476 | 1533039 ~ 1533874 (+) | True | LOC117599511 |
| XM_034312969.1 | mRNA | upstream | 124908 | 1318211 ~ 1319549 (+) | False | LOC117599429 |
| XM_034312966.1 | mRNA | upstream | 217552 | 1018373 ~ 1226905 (+) | True | LOC113543470 |
| XM_034312961.1 | mRNA | upstream | 623291 | 814169 ~ 821166 (+) | False | LOC117599424 |
| XM_034312960.1 | mRNA | upstream | 663598 | 778955 ~ 780859 (+) | True | LOC117599423 |
| XM_034313111.1 | mRNA | upstream | 727886 | 702044 ~ 716571 (+) | True | LOC117599467 |
| XM_034312973.1 | mRNA | downstream | 86861 | 1531424 ~ 1532846 (+) | True | LOC117599433 |
| XM_034312974.1 | mRNA | downstream | 870010 | 2314573 ~ 2315314 (+) | True | LOC117599434 |
| XM_034313124.1 | mRNA | downstream | 872088 | 2316651 ~ 2317780 (+) | False | LOC113543528 |
| XM_034312977.1 | mRNA | downstream | 1180839 | 2625402 ~ 2628545 (+) | True | LOC117599437 |
| XM_034312979.1 | mRNA | downstream | 1189039 | 2633602 ~ 2645389 (+) | True | LOC113525606 |
| XR_004579943.1 | other | upstream | 122129 | 1319749 ~ 1322328 (+) | True | LOC117599530 |
| TU326236 | other | upstream | 124974 | 1317936 ~ 1319483 (+) | True | LOC117599429 |
| TU326222 | other | upstream | 218759 | 1224644 ~ 1225698 (+) | False | LOC113543470 |
| XR_004579914.1 | other | upstream | 241097 | 1200071 ~ 1203360 (+) | True | LOC117599501 |
| XR_004579896.1 | other | upstream | 375879 | 1068083 ~ 1068578 (+) | True | LOC117599483 |
| TU326263 | other | downstream | 85280 | 1529843 ~ 1531055 (+) | True | G275285 |
| XR_004579892.1 | other | downstream | 92697 | 1537260 ~ 1537746 (+) | True | LOC117599479 |
| XR_004579895.1 | other | downstream | 372423 | 1816986 ~ 1817485 (+) | False | LOC117599482 |
| TU326306 | other | downstream | 583630 | 2028193 ~ 2030242 (+) | True | G275319 |
| XR_004579893.1 | other | downstream | 698838 | 2143401 ~ 2143896 (+) | False | LOC117599480 |
