Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU134868 |
| length | 257 |
| lncRNA type | inter_gene |
| GC content | 0.34 |
| exon number | 1 |
| gene id | G114250 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047601.1 |
| NCBI id | CM018547.1 |
| chromosome length | 30450434 |
| location | 12906957 ~ 12907213 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU134862 | lncRNA | upstream | 2075 | 12887208 ~ 12904882 (+) | True | G114244 |
| TU134858 | lncRNA | upstream | 23831 | 12878689 ~ 12883126 (+) | True | G114241 |
| XR_004578476.1 | lncRNA | upstream | 179098 | 12726799 ~ 12727859 (+) | True | LOC117597727 |
| TU134796 | lncRNA | upstream | 209500 | 12697195 ~ 12697457 (+) | False | LOC113542746 |
| TU134795 | lncRNA | upstream | 209837 | 12696755 ~ 12697120 (+) | False | LOC113542746 |
| TU134886 | lncRNA | downstream | 99302 | 13006515 ~ 13010071 (+) | True | G114268 |
| XR_003403005.2 | lncRNA | downstream | 110360 | 13017573 ~ 13021651 (+) | True | LOC113528898 |
| TU134924 | lncRNA | downstream | 150396 | 13057609 ~ 13058192 (+) | True | G114304 |
| TU134940 | lncRNA | downstream | 152934 | 13060147 ~ 13060538 (+) | True | G114319 |
| TU134943 | lncRNA | downstream | 154546 | 13061759 ~ 13063393 (+) | False | G114322 |
| XM_034306149.1 | mRNA | upstream | 192226 | 12708022 ~ 12714731 (+) | False | LOC117597726 |
| XM_034306146.1 | mRNA | upstream | 192226 | 12708022 ~ 12714731 (+) | False | LOC117597726 |
| XM_034306145.1 | mRNA | upstream | 193956 | 12708018 ~ 12713001 (+) | False | LOC117597726 |
| XM_026917604.2 | mRNA | downstream | 158691 | 13065904 ~ 13490535 (+) | False | diaph2 |
| XM_026917602.2 | mRNA | downstream | 158692 | 13065905 ~ 13490535 (+) | True | diaph2 |
| XM_026917605.2 | mRNA | downstream | 158692 | 13065905 ~ 13490535 (+) | False | diaph2 |
| XM_026917603.2 | mRNA | downstream | 160091 | 13067304 ~ 13490535 (+) | False | diaph2 |
| XM_026917577.2 | mRNA | downstream | 1209735 | 14116948 ~ 14158247 (+) | True | tnmd |
| XR_004578475.1 | other | upstream | 192226 | 12713570 ~ 12714731 (+) | False | LOC117597726 |
| XR_004578474.1 | other | upstream | 193956 | 12708009 ~ 12713001 (+) | True | LOC117597726 |
| XR_004578424.1 | other | upstream | 215878 | 12689634 ~ 12691079 (+) | False | LOC113542746 |
| XR_004578423.1 | other | upstream | 215878 | 12689634 ~ 12691079 (+) | False | LOC113542746 |
| TU134395 | other | upstream | 643695 | 12259423 ~ 12263262 (+) | True | G113831 |
| trnae-cuc_17 | other | downstream | 423574 | 13330787 ~ 13330858 (+) | True | trnae-cuc_17 |
| trnat-agu_9 | other | downstream | 1512575 | 14419788 ~ 14419861 (+) | True | trnat-agu_9 |
| TU135978 | other | downstream | 2092621 | 14999834 ~ 15012185 (+) | False | ablim3 |
| TU136030 | other | downstream | 2144102 | 15051315 ~ 15052426 (+) | False | G115272 |
| TU136032 | other | downstream | 2146871 | 15054084 ~ 15055472 (+) | True | syce3 |
