Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU12842 |
| length | 206 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G10809 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 19829292 ~ 19829497 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU12792 | lncRNA | upstream | 83363 | 19745661 ~ 19745929 (+) | True | G10763 |
| TU12789 | lncRNA | upstream | 86797 | 19742126 ~ 19742495 (+) | True | G10760 |
| TU12776 | lncRNA | upstream | 94487 | 19694287 ~ 19734805 (+) | True | G10748 |
| XR_003404305.2 | lncRNA | upstream | 95590 | 19728638 ~ 19733702 (+) | False | LOC113542441 |
| XR_003404303.2 | lncRNA | upstream | 95590 | 19730590 ~ 19733702 (+) | False | LOC113542441 |
| TU12864 | lncRNA | downstream | 40749 | 19870246 ~ 19870450 (+) | True | G10828 |
| TU12940 | lncRNA | downstream | 115478 | 19944975 ~ 19946311 (+) | False | LOC113542572 |
| TU12949 | lncRNA | downstream | 117608 | 19947105 ~ 19947437 (+) | True | G10904 |
| TU13008 | lncRNA | downstream | 198625 | 20028122 ~ 20072852 (+) | False | G10957 |
| TU13007 | lncRNA | downstream | 241682 | 20071179 ~ 20072852 (+) | True | G10957 |
| XM_026940300.2 | mRNA | upstream | 1695 | 19816420 ~ 19827597 (+) | True | syt11b |
| XM_026939955.2 | mRNA | upstream | 14443 | 19805519 ~ 19814849 (+) | True | si:dkey-239n17.4 |
| XM_026926647.2 | mRNA | upstream | 208249 | 19613670 ~ 19621043 (+) | False | tmem79b |
| XM_034307218.1 | mRNA | upstream | 208249 | 19613670 ~ 19621043 (+) | False | tmem79b |
| XM_026926646.2 | mRNA | upstream | 208249 | 19613672 ~ 19621043 (+) | True | tmem79b |
| XM_026940233.2 | mRNA | downstream | 37041 | 19866538 ~ 19887317 (+) | True | dcst1 |
| XM_026939662.2 | mRNA | downstream | 58615 | 19888112 ~ 19914579 (+) | True | adam15 |
| XM_026939663.2 | mRNA | downstream | 58617 | 19888114 ~ 19914579 (+) | False | adam15 |
| XM_026939664.2 | mRNA | downstream | 58622 | 19888119 ~ 19914579 (+) | False | adam15 |
| XM_026939563.2 | mRNA | downstream | 87448 | 19916945 ~ 19923840 (+) | True | si:dkey-7j14.6 |
| TU12774 | other | upstream | 95891 | 19727844 ~ 19733401 (+) | True | LOC113542441 |
| TU12775 | other | upstream | 95891 | 19730151 ~ 19733401 (+) | False | LOC113542441 |
| trnaq-cug | other | upstream | 160289 | 19668932 ~ 19669003 (+) | True | trnaq-cug |
| XR_003403485.1 | other | upstream | 1658787 | 18170367 ~ 18170505 (+) | True | LOC113534245 |
| XR_004579062.1 | other | upstream | 2276783 | 17494849 ~ 17552509 (+) | False | plppr5b |
| TU13438 | other | downstream | 719076 | 20548573 ~ 20551038 (+) | True | G11317 |
| TU13525 | other | downstream | 844723 | 20674220 ~ 20676773 (+) | True | G11401 |
| XR_003404321.2 | other | downstream | 1546690 | 21376187 ~ 21432781 (+) | False | nbeal2 |
| XR_004578200.1 | other | downstream | 2112695 | 21942192 ~ 21945409 (+) | False | LOC117597357 |
| TU14535 | other | downstream | 2467632 | 22297129 ~ 22304154 (+) | False | dbpb |
