Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU160447 |
| length | 329 |
| RNA type | TUCP |
| GC content | 0.51 |
| exon number | 2 |
| gene id | LOC117597783 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047602.1 |
| NCBI id | CM018548.1 |
| chromosome length | 30442583 |
| location | 20271589 ~ 20273976 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU160419 | lncRNA | downstream | 85249 | 20185255 ~ 20186401 (-) | True | G135832 |
| TU160222 | lncRNA | downstream | 256847 | 20014574 ~ 20014803 (-) | True | G135644 |
| TU160220 | lncRNA | downstream | 258879 | 20012565 ~ 20012771 (-) | True | G135642 |
| TU160202 | lncRNA | downstream | 271407 | 19949645 ~ 20000243 (-) | False | G135624 |
| TU160201 | lncRNA | downstream | 321301 | 19949645 ~ 19950349 (-) | True | G135624 |
| TU160747 | lncRNA | upstream | 509189 | 20782387 ~ 20792857 (-) | True | G136142 |
| TU160825 | lncRNA | upstream | 618757 | 20891955 ~ 20892408 (-) | True | G136190 |
| TU160834 | lncRNA | upstream | 634870 | 20908068 ~ 20910023 (-) | True | G136198 |
| TU160842 | lncRNA | upstream | 663923 | 20937121 ~ 20938161 (-) | False | gnb1a |
| TU160849 | lncRNA | upstream | 682084 | 20955282 ~ 20955845 (-) | True | G136212 |
| XM_026925088.2 | mRNA | downstream | 95529 | 20171393 ~ 20176121 (-) | True | slc25a27 |
| XM_026925391.2 | mRNA | downstream | 266260 | 19973564 ~ 20005390 (-) | True | LOC113533329 |
| XM_026925396.2 | mRNA | downstream | 304767 | 19946474 ~ 19966883 (-) | False | LOC113533330 |
| XM_026925395.2 | mRNA | downstream | 304767 | 19946474 ~ 19966883 (-) | True | LOC113533330 |
| XM_034306662.1 | mRNA | downstream | 304779 | 19946474 ~ 19966871 (-) | False | LOC113533330 |
| XM_034306775.1 | mRNA | upstream | 235528 | 20508726 ~ 20704564 (-) | False | cacna2d3a |
| XM_026925413.2 | mRNA | upstream | 235528 | 20508726 ~ 20704564 (-) | True | cacna2d3a |
| XM_026925242.2 | mRNA | upstream | 484518 | 20757716 ~ 20767480 (-) | True | LOC113533248 |
| XM_026925290.2 | mRNA | upstream | 512736 | 20785934 ~ 20902575 (-) | False | cacna1db |
| XM_026925295.2 | mRNA | upstream | 512736 | 20785934 ~ 20902574 (-) | False | cacna1db |
| trnat-cgu_2 | other | downstream | 230699 | 20040880 ~ 20040951 (-) | True | trnat-cgu_2 |
| TU160320 | other | downstream | 230962 | 20040297 ~ 20040688 (-) | True | G135737 |
| TU160210 | other | downstream | 277906 | 19990863 ~ 19993744 (-) | False | LOC113533329 |
| TU159186 | other | downstream | 2009432 | 18253585 ~ 18262218 (-) | False | dynll1 |
| TU159181 | other | downstream | 2009694 | 18259585 ~ 18261956 (-) | False | dynll1 |
| TU160844 | other | upstream | 671477 | 20944675 ~ 20965470 (-) | False | gnb1a |
| TU161272 | other | upstream | 1083530 | 21356728 ~ 21361844 (-) | True | G136569 |
| XR_004578618.1 | other | upstream | 6034890 | 26308088 ~ 26313982 (-) | False | LOC113546035 |
| TU165388 | other | upstream | 6826071 | 27099269 ~ 27158050 (-) | True | G140026 |
| XR_004578589.1 | other | upstream | 6833700 | 27106898 ~ 27115874 (-) | False | rassf2a |
