Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026919367.2 |
| length | 1078 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 5 |
| gene id | lsm4 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 19418684 ~ 19423950 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K12623 | LSM4; U6 snRNA-associated Sm-like protein LSm4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU218427 | lncRNA | downstream | 15470 | 19400044 ~ 19403214 (-) | True | G184561 |
| TU218309 | lncRNA | downstream | 102321 | 19316119 ~ 19316363 (-) | True | trnav-uac_6 |
| TU218305 | lncRNA | downstream | 105289 | 19305312 ~ 19313395 (-) | True | G184463 |
| TU218304 | lncRNA | downstream | 107729 | 19305312 ~ 19310955 (-) | False | G184463 |
| TU218306 | lncRNA | downstream | 107729 | 19305312 ~ 19310955 (-) | False | G184463 |
| TU218442 | lncRNA | upstream | 8773 | 19432723 ~ 19432927 (-) | True | G184576 |
| TU218443 | lncRNA | upstream | 9487 | 19433437 ~ 19437580 (-) | True | G184577 |
| TU218444 | lncRNA | upstream | 15758 | 19439708 ~ 19440069 (-) | True | G184578 |
| TU218458 | lncRNA | upstream | 35896 | 19459846 ~ 19464541 (-) | True | G184592 |
| TU218464 | lncRNA | upstream | 64192 | 19488142 ~ 19488374 (-) | True | G184598 |
| XM_034308665.1 | mRNA | downstream | 222338 | 19101740 ~ 19196346 (-) | False | adgrl2a |
| XM_034308670.1 | mRNA | downstream | 223097 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_034308669.1 | mRNA | downstream | 223097 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_034308668.1 | mRNA | downstream | 223097 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_034308667.1 | mRNA | downstream | 223097 | 19101740 ~ 19195587 (-) | False | adgrl2a |
| XM_026919538.2 | mRNA | upstream | 123 | 19424073 ~ 19429693 (-) | True | ddx49 |
| XM_026929313.1 | mRNA | upstream | 40691 | 19464641 ~ 19475095 (-) | True | comp |
| XM_026934149.2 | mRNA | upstream | 52870 | 19476820 ~ 19483819 (-) | True | tmem38a |
| XM_026922017.2 | mRNA | upstream | 237115 | 19661065 ~ 19664681 (-) | True | gamt |
| XM_026914690.2 | mRNA | upstream | 274216 | 19698166 ~ 19703302 (-) | True | abhd8b |
| trnav-uac_6 | other | downstream | 102310 | 19316302 ~ 19316374 (-) | False | trnav-uac_6 |
| trnai-uau_4 | other | downstream | 102597 | 19316015 ~ 19316087 (-) | True | trnai-uau_4 |
| trnav-uac_5 | other | downstream | 103599 | 19315013 ~ 19315085 (-) | True | trnav-uac_5 |
| trnav-uac_4 | other | downstream | 105116 | 19313496 ~ 19313568 (-) | True | trnav-uac_4 |
| trnav-uac_3 | other | downstream | 106240 | 19312372 ~ 19312444 (-) | True | trnav-uac_3 |
| TU218611 | other | upstream | 271312 | 19695262 ~ 19697709 (-) | True | G184716 |
| TU218625 | other | upstream | 282225 | 19706175 ~ 19712591 (-) | False | dda1 |
| TU219835 | other | upstream | 1866499 | 21290449 ~ 21324977 (-) | True | G185706 |
| TU219847 | other | upstream | 1925059 | 21349009 ~ 21349850 (-) | True | G185718 |
| TU220102 | other | upstream | 2571236 | 21995186 ~ 21996027 (-) | False | LOC117598437 |
