Gene
RNA
| Item | Value |
|---|---|
| gene id | adgrl2a |
| gene name | adgrl2 |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047605.1 |
| NCBI id | CM018551.1 |
| chromosome length | 26640196 |
| location | 19101740 ~ 19196346 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| symbol | description |
|---|---|
| adgrl2 | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and brain development. Predicted to act upstream of or within positive regulation of synapse assembly and response to bacterium. Predicted to be located in axon and plasma membrane. Predicted to be integral component of postsynaptic membrane. Predicted to be active in glutamatergic synapse and neuron projection. Predicted to be integral component of plasma membrane. |
| description |
|---|
| PREDICTED: adhesion G protein-coupled receptor L2 isoform X4 |
| id | description |
|---|---|
| K04593 | ADGRL2, LPHN2; adhesion G protein-coupled receptor L2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_034308663.1 | False | 6359 | mRNA | 0.48 | 24 | 19101740 | 19195587 |
| XM_034308664.1 | True | 6571 | mRNA | 0.49 | 25 | 19101740 | 19195587 |
| XM_034308665.1 | False | 5758 | mRNA | 0.48 | 24 | 19101740 | 19196346 |
| XM_034308666.1 | False | 6343 | mRNA | 0.49 | 23 | 19101740 | 19195586 |
| XM_034308667.1 | False | 6341 | mRNA | 0.48 | 23 | 19101740 | 19195587 |
| XM_034308668.1 | False | 6320 | mRNA | 0.49 | 23 | 19101740 | 19195587 |
| XM_034308669.1 | False | 6305 | mRNA | 0.49 | 22 | 19101740 | 19195587 |
| XM_034308670.1 | False | 6287 | mRNA | 0.49 | 21 | 19101740 | 19195587 |
| XM_034308671.1 | False | 6211 | mRNA | 0.49 | 22 | 19101740 | 19195586 |
| XM_034308672.1 | False | 4458 | mRNA | 0.51 | 24 | 19103691 | 19195587 |
| XM_034308673.1 | False | 4552 | mRNA | 0.51 | 25 | 19103620 | 19195587 |
| XM_034308674.1 | False | 4539 | mRNA | 0.51 | 25 | 19103599 | 19195587 |
| XM_034308675.1 | False | 4467 | mRNA | 0.51 | 23 | 19103664 | 19195587 |
| XM_034308676.1 | False | 4413 | mRNA | 0.51 | 23 | 19103596 | 19195586 |
| XM_034308677.1 | False | 4376 | mRNA | 0.51 | 23 | 19103638 | 19195586 |
| XM_034308678.1 | False | 4313 | mRNA | 0.51 | 23 | 19103746 | 19195586 |
| XM_034308679.1 | False | 4313 | mRNA | 0.51 | 23 | 19104226 | 19195586 |
| XM_034308680.1 | False | 4355 | mRNA | 0.51 | 22 | 19103646 | 19195586 |
| XM_034308681.1 | False | 6325 | mRNA | 0.49 | 22 | 19101740 | 19195586 |
| XM_034308682.1 | False | 6196 | mRNA | 0.49 | 21 | 19101740 | 19195586 |
| XM_034308683.1 | False | 6157 | mRNA | 0.49 | 20 | 19101740 | 19195586 |
| XM_034308684.1 | False | 6172 | mRNA | 0.49 | 21 | 19101740 | 19195586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| prkacba | prkacb,LOC107745335,LOC103034112,LOC108411205,LOC108267323 | coding | downstream | 193277 | 18893868 ~ 18908463 (-) |
| samd13 | samd13,LOC107592550 | coding | downstream | 213065 | 18877148 ~ 18888675 (-) |
| dnase2b | dnase2b | coding | downstream | 230642 | 18867648 ~ 18871098 (-) |
| rpf1 | rpf1,LOC107669022 | coding | downstream | 234483 | 18859324 ~ 18867257 (-) |
| spata1 | NA | coding | downstream | 244177 | 18852585 ~ 18857563 (-) |
| trnav-uac_1 | NA | coding | upstream | 113665 | 19310011 ~ 19310083 (-) |
| trnav-uac_2 | NA | coding | upstream | 115465 | 19311811 ~ 19311883 (-) |
| trnai-uau_3 | NA | coding | upstream | 115839 | 19312185 ~ 19312256 (-) |
| trnav-uac_3 | NA | coding | upstream | 116026 | 19312372 ~ 19312444 (-) |
| trnav-uac_4 | NA | coding | upstream | 117150 | 19313496 ~ 19313568 (-) |
| LOC113526295 | NA | non-coding | downstream | 51263 | 19034294 ~ 19050477 (-) |
| G184255 | NA | non-coding | downstream | 140886 | 18959249 ~ 18960854 (-) |
| LOC113530379 | NA | non-coding | downstream | 153114 | 18940102 ~ 18948626 (-) |
| G183826 | NA | non-coding | downstream | 1203387 | 17898146 ~ 17898353 (-) |
| G183809 | NA | non-coding | downstream | 1222331 | 17879205 ~ 17879409 (-) |
| G184439 | NA | non-coding | upstream | 24479 | 19220825 ~ 19271310 (-) |
| G184463 | NA | non-coding | upstream | 108966 | 19305312 ~ 19313395 (-) |
| G184561 | pde4c | non-coding | upstream | 203698 | 19400044 ~ 19403214 (-) |
| G184576 | NA | non-coding | upstream | 236377 | 19432723 ~ 19432927 (-) |
| G184577 | klhl26,LOC107680559,LOC107747058 | non-coding | upstream | 237091 | 19433437 ~ 19437580 (-) |
| traf5 | LOC108271110,LOC108411952 | other | downstream | 1749371 | 17342815 ~ 17352369 (-) |
| zgc:172076 | LOC108271265,LOC108411951 | other | downstream | 1759486 | 17245772 ~ 17342254 (-) |
| micos13 | c10h19orf70,cunh19orf70 | other | downstream | 2822883 | 16274882 ~ 16278857 (-) |
| G182210 | NA | other | downstream | 3409390 | 15690774 ~ 15692350 (-) |
| lama3 | LOC108270685 | other | downstream | 4521993 | 14550906 ~ 14579747 (-) |
| trnav-uac_6 | NA | other | upstream | 119773 | 19316119 ~ 19316374 (-) |
| G184716 | rps15,LOC107685215,LOC107578086 | other | upstream | 498916 | 19695262 ~ 19697709 (-) |
| dda1 | dda1,LOC107685208,LOC105913185,LOC105939318 | other | upstream | 509736 | 19706082 ~ 19712597 (-) |
| elavl1b | LOC108270814,LOC108437281,LOC103034406,LOC105889513 | other | upstream | 986696 | 20183042 ~ 20192143 (-) |
| mob3c | mob3c,LOC108270829,LOC103027889,LOC108438648,LOC106613547,LOC106574029,LOC107572948 | other | upstream | 1726949 | 20923295 ~ 20929955 (-) |
