trnav-uac_2


Basic Information

Item Value
gene id trnav-uac_2
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 19311811 ~ 19311883 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnav-uac_2
GGTTCCATAGTGTCGTGGTTATCACGTCTGCTTTACGCGCAGAAGGTCCTGGGTTCAAGCCCCAGTGGAACCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnav-uac_2 True 73 tRNA 0.55 1 19311811 19311883

Neighbor

gene id symbol gene type direction distance location
trnav-uac_1 NA coding downstream 1728 19310011 ~ 19310083 (-)
adgrl2a adgrl2 coding downstream 115465 19101740 ~ 19196346 (-)
prkacba prkacb,LOC107745335,LOC103034112,LOC108411205,LOC108267323 coding downstream 403348 18893868 ~ 18908463 (-)
samd13 samd13,LOC107592550 coding downstream 423136 18877148 ~ 18888675 (-)
dnase2b dnase2b coding downstream 440713 18867648 ~ 18871098 (-)
trnai-uau_3 NA coding upstream 302 19312185 ~ 19312256 (-)
trnav-uac_3 NA coding upstream 489 19312372 ~ 19312444 (-)
trnav-uac_4 NA coding upstream 1613 19313496 ~ 19313568 (-)
trnav-uac_5 NA coding upstream 3130 19315013 ~ 19315085 (-)
trnai-uau_4 NA coding upstream 4132 19316015 ~ 19316087 (-)
G184439 NA non-coding downstream 40501 19220825 ~ 19271310 (-)
LOC113526295 NA non-coding downstream 261334 19034294 ~ 19050477 (-)
G184255 NA non-coding downstream 350957 18959249 ~ 18960854 (-)
LOC113530379 NA non-coding downstream 363185 18940102 ~ 18948626 (-)
G183826 NA non-coding downstream 1413458 17898146 ~ 17898353 (-)
G184561 pde4c non-coding upstream 88161 19400044 ~ 19403214 (-)
G184576 NA non-coding upstream 120840 19432723 ~ 19432927 (-)
G184577 klhl26,LOC107680559,LOC107747058 non-coding upstream 121554 19433437 ~ 19437580 (-)
G184578 NA non-coding upstream 127825 19439708 ~ 19440069 (-)
G184592 NA non-coding upstream 147963 19459846 ~ 19464541 (-)
traf5 LOC108271110,LOC108411952 other downstream 1959442 17342815 ~ 17352369 (-)
zgc:172076 LOC108271265,LOC108411951 other downstream 1969557 17245772 ~ 17342254 (-)
micos13 c10h19orf70,cunh19orf70 other downstream 3032954 16274882 ~ 16278857 (-)
G182210 NA other downstream 3619461 15690774 ~ 15692350 (-)
lama3 LOC108270685 other downstream 4732064 14550906 ~ 14579747 (-)
trnav-uac_6 NA other upstream 4236 19316119 ~ 19316374 (-)
G184716 rps15,LOC107685215,LOC107578086 other upstream 383379 19695262 ~ 19697709 (-)
dda1 dda1,LOC107685208,LOC105913185,LOC105939318 other upstream 394199 19706082 ~ 19712597 (-)
elavl1b LOC108270814,LOC108437281,LOC103034406,LOC105889513 other upstream 871159 20183042 ~ 20192143 (-)
mob3c mob3c,LOC108270829,LOC103027889,LOC108438648,LOC106613547,LOC106574029,LOC107572948 other upstream 1611412 20923295 ~ 20929955 (-)

Expression


Co-expression Network