mob3c (mob3c,LOC108270829,LOC103027889,LOC108438648,LOC106613547,LOC106574029,LOC107572948)


Basic Information

Item Value
gene id mob3c
gene name mob3c,LOC108270829,LOC103027889,LOC108438648,LOC106613547,LOC106574029,LOC107572948
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 20923295 ~ 20929955 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU219678
AGGAAGAGAAGCCAAACAACTTTTCTCTCTGCTTTTCGagtcttgtttgtttttagactGGTCAGGTTTTCTGATGAGTTACTGAGACAGAACTCTTTAGACAACGGTGTAATCCATGTCCTCTGGCTGCTAACTGGAGGCAGAGAATTTCTCCTGAGATTTCCCATAGATCCCCACAGCATTCCAAGCATTCAGGACGGGACTTGAGCCAGgGGTTCCTTTTCCGAAGAACTTCCAGCAGGTCTGCAAAAAGATTCTAAGTCGGCTCTTccgtgtgtttgtgcatgtttacaTCCACCACTTTGACAGCATCTGCAACATGGGAGCTGAGGCTCATGTCAACACCTGCTacaaacactactactacttcaTCTCTGAGTTTAGTCTCATCGAACACTCCGAACTGGAGCCACTGAGAGCCATGACAGAACGGATCTGTAACTGAAGCAGGTGGACAGTGAAATAACCCCTAAAAGCTGACTGCCCACGTTCATACATCAATGATCCAAGCATCTGATATTTTTAAAccttcatttttaatgtatatttgaCCTAAGGTTCACCTTGGTGTATTAGGATATTATCCTACTAAATGAGCGGAGGTAGAGCTGTAGCAGACTTGATATTCCtggtgcttttaaaaaaatgtgcttttatggTTAAAGGATGCTATATGAGCCAATATcattacatttcttttcttttctttcttttttttttacacatcagaCTACAAAAGAACCTTCAAATAGATAGGATCATCTTTTGTCAACTTTGTACGTTGCTTTAAACTACAAAAGGTCTGCCAGTGACAAAaatttgagggtttttttgagtttttatgTAGCATATTTACATGTCTGAGATTTGAAGTCTGAAATCTAACTCGAAAATACTCAGTGTTATCAGTTTTGCCCCTGAGGAGTATACTGACTTTGTGCTTTTTGGAACTGTGCTGGGGCATGTTAAACGCCTGGGTACTCAGAGCAGCTTGAAAAACGACATTCTTGTTCTCTCTAATGCAAATACCACTGTCAAAGGGCTGACTGTGGCATTTCTATTGCTTGTATCATAGATTTTATGTGAATGCATACTGttcttgtgttattttatttatacatcatTTTACAACCACAtataaattaaatcattatcctaagaatttatttttaaaaccagCTGAACAACCAAACATGTTGTTCAAGTTTGCCTAATCTTTCTGTTATTAGTCTCAAAGTGAGCTTTATTGTGTCTTTAATAGTACAGCAGCATGCAGACCAAGTCCTAACActcatttatattataatttattttctggctATTAGACTTGTAAAattcattgtaaatataaagagCTTATGTGAGTGTCATGTAAAGGAAGACAGATGATACTGTGTTGCCCCACATGAACTGAAATGTATGGCCCCCTGGTGTCCAAAGTTGAAATGGGT
>XM_026919394.2
caaatacacacatatgtacacacacacagtcagacagtaGGGGCTGGCTGACAAAATCAGGATATGACATCATTGCCAGGAAGAGAAGCCAAACAACTTTTCTCTCTGCTTTTCGagtcttgtttgtttttagactGGTCAGGTTTTCTGATGAGTTACTGAGACAGAACTCTTTAGACAACGGTGTAATCCATGTCCTCTGGCTGCTAACTGGAGGCAGAGAATTTCTCCTGAGATTTCCCATAGATCCCCACAGCATTCCAAGCATTCAGGACGGGACTTGAGCCAGCATCATCAGTTGATGAAACAGGAGACTTCATCTCATCTATCCTGACATTTTTGGTGGAGATTCTACTATTAGCACAAGCTCTAGAAGCATGGCTCTGTGCCTTGGCCAAGTGTTCAGCAAAGACAAGACGTTCAGGCCTCGGAAGCGCTTTGAGCCTGGCACGCAGCGGTTTGAGCTGTATAAGAGAGCCCAGGCATCACTGAAGTCAGGGTTGGACCTCAGGAAGGTGGTTCAGCTGCCTGAGGGAGAAAACATTAATGACTGGATTGCTGTGCACGTGGTAGATTTCTTTAACCGCATCAACCTGATCTATGGAACAGTTAGCGAATTCTGCACAGAGAGAACTTGCCCCGTCATGTCTGGAGGCCCTCGCTACGAGTACAGATGGCAAGATGGAGACCATTACAAGAAGCCCACCAAACTCCCAGCCCTCCAGTATATGAACCTGCTGATGGACTGGATTGAATCGCTCATCAACAATGAGAATATCTTCCCTACACGCATAGgGGTTCCTTTTCCGAAGAACTTCCAGCAGGTCTGCAAAAAGATTCTAAGTCGGCTCTTccgtgtgtttgtgcatgtttacaTCCACCACTTTGACAGCATCTGCAACATGGGAGCTGAGGCTCATGTCAACACCTGCTacaaacactactactacttcaTCTCTGAGTTTAGTCTCATCGAACACTCCGAACTGGAGCCACTGAGAGCCATGACAGAACGGATCTGTAACTGAAGCAGGTGGACAGTGAAATAACCCCTAAAAGCTGACTGCCCACGTTCATACATCAATGATCCAAGCATCTGATATTTTTAAAccttcatttttaatgtatatttgaCCTAAGGTTCACCTTGGTGTATTAGGATATTATCCTACTAAATGAGCGGAGGTAGAGCTGTAGCAGACTTGATATTCCtggtgcttttaaaaaaatgtgcttttatggTTAAAGGATGCTATATGAGCCAATATcattacatttcttttcttttctttcttttttttttacacatcagaCTACAAAAGAACCTTCAAATAGATAGGATCATCTTTTGTCAACTTTGTACGTTGCTTTAAACTACAAAAGGTCTGCCAGTGACAAAaatttgagggtttttttgagtttttatgTAGCATATTTACATGTCTGAGATTTGAAGTCTGAAATCTAACTCGAAAATACTCAGTGTTATCAGTTTTGCCCCTGAGGAGTATACTGACTTTGTGCTTTTTGGAACTGTGCTGGGGCATGTTAAACGCCTGGGTACTCAGAGCAGCTTGAAAAACGACATTCTTGTTCTCTCTAATGCAAATACCACTGTCAAAGGGCTGACTGTGGCATTTCTATTGCTTGTATCATAGATTTTATGTGAATGCATACTGttcttgtgttattttatttatacatcatTTTACAACCACAtataaattaaatcattatcctaagaatttatttttaaaaccagCTGAACAACCAAACATGTTGTTCAAGTTTGCCTAATCTTTCTGTTATTAGTCTCAAAGTGAGCTTTATTGTGTCTTTAATAGTACAGCAGCATGCAGACCAAGTCCTAACActcatttatattataatttattttctggctATTAGACTTGTAAAattcattgtaaatataaagagCTTATGTGAGTGTCATGTAAAGGAAGACAGATGATACTGTGTTGCCCCACATGAACTGAAATGTATGGCCCCCTGGTGTCCAAAGTTGAAATGGGTGCTTTTGTATCTTTACTGTGTATatagtatttcagaaacatcTTGCATGAGAGTCATTTGTATTTATGCTTTCAGATAAGTAAAtagtttttgtattattattattattattattattattatta

Function

symbol description
mob3c Predicted to enable kinase activity. Predicted to act upstream of or within phosphorylation. Orthologous to human MOB3C (MOB kinase activator 3C).

NR:

description
PREDICTED: MOB kinase activator 3C

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU219678 False 1451 lncRNA 0.38 3 20923420 20929878
XM_026919394.2 True 2159 mRNA 0.40 4 20923295 20929955

Neighbor

gene id symbol gene type direction distance location
mknk1 mknk1 coding downstream 1883 20908844 ~ 20921412 (-)
atp5f1b atp5b,LOC107723059,LOC107753829 coding downstream 26811 20891843 ~ 20896484 (-)
rsph3 rsph3,LOC107580271 coding downstream 44231 20868387 ~ 20879064 (-)
abcb11b abcb11b,abcb11,LOC108270741,LOC108438644,LOC107692229,LOC107602798,LOC105911976 coding downstream 57370 20843323 ~ 20865925 (-)
il12rb1 NA coding downstream 126631 20787148 ~ 20796664 (-)
zfyve9b LOC108270756,LOC108438649 coding upstream 18239 20948194 ~ 20963442 (-)
btf3l4 bt3l4,btf3l4,LOC103026176,LOC105028135,LOC107562065 coding upstream 34632 20964587 ~ 20967852 (-)
ptgfr ptgfr coding upstream 38655 20968610 ~ 20970863 (-)
zgpat zgpat coding upstream 60828 20990783 ~ 21000914 (-)
rtel1 rtel1,LOC107579445 coding upstream 72834 21002789 ~ 21020973 (-)
G185304 NA non-coding downstream 263638 20659092 ~ 20659657 (-)
G185151 NA non-coding downstream 492796 20430275 ~ 20430499 (-)
G185145 NA non-coding downstream 561722 20357176 ~ 20361573 (-)
G185139 NA non-coding downstream 606023 20303541 ~ 20317272 (-)
G185138 NA non-coding downstream 639033 20283695 ~ 20284262 (-)
G185596 LOC108270818 non-coding upstream 16980 20946935 ~ 20967320 (-)
G185624 NA non-coding upstream 146374 21076329 ~ 21339757 (-)
G185633 NA non-coding upstream 165066 21095021 ~ 21173783 (-)
G185637 npepps,LOC102793525,LOC101475000 non-coding upstream 172064 21102019 ~ 21102999 (-)
G185628 NA non-coding upstream 174374 21104329 ~ 21125097 (-)
elavl1b LOC108270814,LOC108437281,LOC103034406,LOC105889513 other downstream 731152 20183042 ~ 20192143 (-)
dda1 dda1,LOC107685208,LOC105913185,LOC105939318 other downstream 1210698 19706082 ~ 19712597 (-)
G184716 rps15,LOC107685215,LOC107578086 other downstream 1225586 19695262 ~ 19697709 (-)
trnav-uac_6 NA other downstream 1606921 19316119 ~ 19316374 (-)
traf5 LOC108271110,LOC108411952 other downstream 3570926 17342815 ~ 17352369 (-)
G185706 LOC108270801 other upstream 360494 21290449 ~ 21324977 (-)
G185718 NA other upstream 419054 21349009 ~ 21349850 (-)
cntnap5l LOC108270728,LOC108439930 other upstream 869191 21799146 ~ 21895406 (-)
LOC117598437 LOC108191637,LOC107104758 other upstream 1065193 21995148 ~ 21996155 (-)
ptprc NA other upstream 2722895 23652850 ~ 23684011 (-)

Expression


Co-expression Network