Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026924814.2 |
| length | 965 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | hmga1b |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047596.1 |
| NCBI id | CM018542.1 |
| chromosome length | 35203048 |
| location | 9450925 ~ 9454462 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28580 | lncRNA | upstream | 16876 | 9433975 ~ 9434211 (+) | True | G24118 |
| TU28567 | lncRNA | upstream | 22870 | 9426857 ~ 9428217 (+) | True | G24108 |
| XR_004577370.1 | lncRNA | upstream | 93089 | 9337143 ~ 9357998 (+) | True | LOC117596200 |
| TU28378 | lncRNA | upstream | 132037 | 9318314 ~ 9319050 (+) | True | G23934 |
| TU28377 | lncRNA | upstream | 132196 | 9318314 ~ 9318891 (+) | False | G23934 |
| TU28574 | lncRNA | downstream | 14944 | 9468544 ~ 9471574 (+) | False | G24114 |
| TU28575 | lncRNA | downstream | 14944 | 9468544 ~ 9471574 (+) | False | G24114 |
| TU28576 | lncRNA | downstream | 14944 | 9468544 ~ 9471574 (+) | True | G24114 |
| TU28605 | lncRNA | downstream | 65066 | 9518666 ~ 9518987 (+) | True | G24137 |
| TU28635 | lncRNA | downstream | 134697 | 9588297 ~ 9588508 (+) | True | G24159 |
| XM_026925509.2 | mRNA | upstream | 355345 | 9088734 ~ 9095742 (+) | True | abhd14b |
| XM_026926274.2 | mRNA | upstream | 387589 | 9050896 ~ 9063498 (+) | True | si:ch211-161c3.5 |
| XM_026928057.2 | mRNA | upstream | 400588 | 9047050 ~ 9050499 (+) | True | LOC113535004 |
| XM_026924543.2 | mRNA | upstream | 446146 | 8997005 ~ 9004941 (+) | True | cysltr3 |
| XM_026915122.2 | mRNA | upstream | 603142 | 8798743 ~ 8847945 (+) | True | uba7 |
| XM_026918709.2 | mRNA | downstream | 1076 | 9454676 ~ 9467790 (+) | True | nudt3b |
| XM_026920505.2 | mRNA | downstream | 19939 | 9473539 ~ 9498758 (+) | False | pacsin1b |
| XM_026920543.2 | mRNA | downstream | 29839 | 9483439 ~ 9498758 (+) | False | pacsin1b |
| XM_026920515.2 | mRNA | downstream | 30231 | 9483831 ~ 9498758 (+) | False | pacsin1b |
| XM_026920534.2 | mRNA | downstream | 35124 | 9488724 ~ 9498758 (+) | False | pacsin1b |
| XR_003402786.2 | other | upstream | 3697983 | 5717530 ~ 5753104 (+) | False | rbl1 |
| TU26124 | other | upstream | 4242223 | 5208346 ~ 5208864 (+) | True | G21901 |
| TU26030 | other | upstream | 4362509 | 5088134 ~ 5088578 (+) | True | G21835 |
| XR_004579614.1 | other | upstream | 4691442 | 4754266 ~ 4759645 (+) | True | spega |
| XR_003404681.1 | other | upstream | 4790964 | 4660009 ~ 4660123 (+) | True | LOC113545978 |
| XR_004577034.1 | other | downstream | 138341 | 9591941 ~ 9596854 (+) | False | LOC113532547 |
| TU28879 | other | downstream | 441645 | 9895245 ~ 9907171 (+) | False | LOC113530691 |
| TU29055 | other | downstream | 744366 | 10197966 ~ 10198455 (+) | True | G24500 |
| XR_003403740.2 | other | downstream | 1300915 | 10754515 ~ 10754622 (+) | True | LOC113537259 |
| TU29627 | other | downstream | 1452600 | 10906200 ~ 10908572 (+) | True | G25029 |
