Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU305795 |
| length | 1193 |
| lncRNA type | read_through |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G258275 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 20682370 ~ 20756538 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU305792 | lncRNA | upstream | 1432 | 20663682 ~ 20680938 (+) | True | G258273 |
| TU305646 | lncRNA | upstream | 25303 | 20611541 ~ 20657067 (+) | True | G258162 |
| TU305640 | lncRNA | upstream | 105581 | 20567790 ~ 20576789 (+) | True | G258156 |
| TU305574 | lncRNA | upstream | 295557 | 20369995 ~ 20386813 (+) | True | G258097 |
| TU305577 | lncRNA | upstream | 303036 | 20369995 ~ 20379334 (+) | False | G258097 |
| TU305900 | lncRNA | downstream | 29704 | 20786242 ~ 20790145 (+) | True | G258362 |
| TU305939 | lncRNA | downstream | 146609 | 20903147 ~ 20907459 (+) | False | ubxn10 |
| XR_004579744.1 | lncRNA | downstream | 152278 | 20908816 ~ 20911082 (+) | True | LOC117599282 |
| TU305997 | lncRNA | downstream | 219360 | 20975898 ~ 20976359 (+) | True | G258439 |
| TU306029 | lncRNA | downstream | 328844 | 21085382 ~ 21088222 (+) | True | G258460 |
| XM_026921162.2 | mRNA | upstream | 2300 | 20668113 ~ 20680070 (+) | True | pip4k2ca |
| XM_026920287.2 | mRNA | upstream | 16313 | 20661406 ~ 20666057 (+) | True | igfbp6b |
| XM_026920824.2 | mRNA | upstream | 71657 | 20589717 ~ 20610713 (+) | False | lima1a |
| XM_034312195.1 | mRNA | downstream | 127154 | 20883692 ~ 20886509 (+) | False | LOC113530777 |
| XM_026921092.2 | mRNA | downstream | 127326 | 20883864 ~ 20886509 (+) | True | LOC113530777 |
| XM_026920955.2 | mRNA | downstream | 143584 | 20900122 ~ 20902771 (+) | True | cptp |
| XM_034312060.1 | mRNA | downstream | 146567 | 20903105 ~ 20905396 (+) | True | ubxn10 |
| XM_026921039.2 | mRNA | downstream | 146569 | 20903107 ~ 20905396 (+) | False | ubxn10 |
| XR_003403172.2 | other | upstream | 168175 | 20510244 ~ 20514195 (+) | False | LOC113530729 |
| TU305571 | other | upstream | 283656 | 20390809 ~ 20398714 (+) | True | G258096 |
| TU304946 | other | upstream | 1203475 | 19478302 ~ 19478895 (+) | True | G257622 |
| trnae-cuc_34 | other | upstream | 1649382 | 19032917 ~ 19032988 (+) | True | trnae-cuc_34 |
| TU304341 | other | upstream | 1770656 | 18879568 ~ 18911714 (+) | False | fmnl3 |
| XR_004579743.1 | other | downstream | 146567 | 20903105 ~ 20907250 (+) | False | ubxn10 |
| TU305940 | other | downstream | 146609 | 20903147 ~ 20905073 (+) | False | ubxn10 |
| TU306101 | other | downstream | 471782 | 21228320 ~ 21230871 (+) | False | si:ch73-290k24.5 |
| TU306357 | other | downstream | 781716 | 21538254 ~ 21542254 (+) | False | LOC117599233 |
| trnal-uaa_2 | other | downstream | 1555268 | 22311806 ~ 22311888 (+) | True | trnal-uaa_2 |
