Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU370234 |
| length | 904 |
| lncRNA type | intronic |
| GC content | 0.27 |
| exon number | 2 |
| gene id | G312517 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047615.1 |
| NCBI id | CM018561.1 |
| chromosome length | 21248730 |
| location | 821262 ~ 822746 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU369915 | lncRNA | upstream | 61934 | 715639 ~ 759328 (+) | True | G312277 |
| TU369922 | lncRNA | upstream | 78133 | 739463 ~ 743129 (+) | True | G312283 |
| TU369914 | lncRNA | upstream | 103971 | 714021 ~ 717291 (+) | False | LOC113543349 |
| TU369918 | lncRNA | upstream | 108965 | 711494 ~ 712297 (+) | True | G312280 |
| TU369841 | lncRNA | upstream | 244339 | 574241 ~ 576923 (+) | True | G312221 |
| TU370220 | lncRNA | downstream | 39641 | 862387 ~ 866721 (+) | True | G312509 |
| TU370250 | lncRNA | downstream | 52917 | 875663 ~ 875880 (+) | True | G312531 |
| TU370257 | lncRNA | downstream | 60658 | 883404 ~ 886114 (+) | True | G312534 |
| TU370266 | lncRNA | downstream | 83488 | 906234 ~ 906446 (+) | True | G312540 |
| XR_004580327.1 | lncRNA | downstream | 153875 | 976621 ~ 980051 (+) | True | LOC117599981 |
| XM_026941295.2 | mRNA | upstream | 93397 | 723451 ~ 727865 (+) | True | cbln2a |
| XM_034297687.1 | mRNA | upstream | 103984 | 704778 ~ 717278 (+) | True | LOC113543349 |
| XM_026941468.2 | mRNA | upstream | 126924 | 683806 ~ 694338 (+) | True | LOC113543348 |
| XM_034314815.1 | mRNA | upstream | 143480 | 616751 ~ 677782 (+) | False | mre11a |
| XM_026941381.2 | mRNA | downstream | 45975 | 868721 ~ 873766 (+) | True | rdh10b |
| XM_026940929.2 | mRNA | downstream | 75312 | 898058 ~ 901624 (+) | True | tmem70 |
| XM_034314625.1 | mRNA | downstream | 75472 | 898218 ~ 901624 (+) | False | tmem70 |
| XM_026941207.2 | mRNA | downstream | 124046 | 946792 ~ 965617 (+) | True | trpa1a |
| XM_026940965.2 | mRNA | downstream | 181163 | 1003909 ~ 1012192 (+) | True | shhb |
| XR_004576918.1 | other | upstream | 508534 | 275159 ~ 312728 (+) | False | snap91a |
| TU369780 | other | upstream | 628028 | 189539 ~ 193234 (+) | True | pnrc2 |
| TU369781 | other | upstream | 628028 | 189539 ~ 193234 (+) | False | pnrc2 |
| TU369797 | other | upstream | 645721 | 174238 ~ 175541 (+) | True | G312191 |
| TU369775 | other | upstream | 726337 | 93899 ~ 94925 (+) | True | G312172 |
| TU370320 | other | downstream | 306179 | 1128925 ~ 1131683 (+) | False | paxip1 |
| TU370328 | other | downstream | 309137 | 1131883 ~ 1136020 (+) | False | paxip1 |
| XR_003404390.2 | other | downstream | 1142994 | 1965740 ~ 1977309 (+) | True | c21h5orf22 |
| XR_003404395.2 | other | downstream | 1310468 | 2133214 ~ 2143313 (+) | False | tgs1 |
| TU370902 | other | downstream | 1359233 | 2181979 ~ 2185677 (+) | True | G313112 |
