Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00008371 |
| length | 609 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 7 |
| gene id | XLOC_004416 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007122.7 |
| NCBI id | CM002895.2 |
| chromosome length | 45484837 |
| location | 45426609 ~ 45435014 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006260 | DNA replication | biological_process |
| GO:0006261 | DNA-dependent DNA replication | biological_process |
| GO:0060041 | retina development in camera-type eye | biological_process |
| GO:0006281 | DNA repair | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005663 | DNA replication factor C complex | cellular_component |
| GO:0005524 | ATP binding | molecular_function |
| GO:0003677 | DNA binding | molecular_function |
| GO:0003689 | DNA clamp loader activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040824-3 | Predicted to enable ATP binding activity and DNA binding activity. Predicted to contribute to DNA clamp loader activity. Acts upstream of or within retina development in camera-type eye. Predicted to be part of DNA replication factor C complex. Predicted to be active in nucleus. Is expressed in alar plate midbrain region; immature eye; and nervous system. Orthologous to human RFC4 (replication factor C subunit 4). |
| ensembl_id | ENSDART00000075612 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00008360 | lncRNA | downstream | 71141 | 45359112 ~ 45359656 (-) | False | XLOC_004414 |
| TCONS_00008356 | lncRNA | downstream | 223758 | 45206467 ~ 45207039 (-) | True | XLOC_004412 |
| TCONS_00008347 | lncRNA | downstream | 281885 | 45143497 ~ 45148912 (-) | False | XLOC_004408 |
| TCONS_00008348 | lncRNA | downstream | 281885 | 45147186 ~ 45148912 (-) | True | XLOC_004408 |
| TCONS_00008501 | lncRNA | downstream | 526471 | 44901303 ~ 44904326 (-) | True | XLOC_004404 |
| TCONS_00008366 | mRNA | downstream | 1598 | 45426609 ~ 45429199 (-) | False | XLOC_004416 |
| TCONS_00008365 | mRNA | downstream | 10463 | 45402525 ~ 45420334 (-) | True | XLOC_004415 |
| TCONS_00008364 | mRNA | downstream | 10585 | 45401608 ~ 45420212 (-) | False | XLOC_004415 |
| TCONS_00008363 | mRNA | downstream | 35195 | 45376041 ~ 45395602 (-) | False | XLOC_004414 |
| TCONS_00008374 | mRNA | upstream | 35311 | 45468730 ~ 45470370 (-) | True | XLOC_004417 |
| TCONS_00008317 | other | downstream | 817063 | 44606851 ~ 44613734 (-) | False | XLOC_004396 |
| TCONS_00008303 | other | downstream | 1091577 | 44337157 ~ 44339220 (-) | True | XLOC_004385 |
| TCONS_00008295 | other | downstream | 1307339 | 44123327 ~ 44123458 (-) | True | XLOC_004381 |
| TCONS_00008250 | other | downstream | 4055671 | 41375011 ~ 41375126 (-) | True | XLOC_004339 |
| TCONS_00008244 | other | downstream | 4346434 | 41078191 ~ 41084363 (-) | True | XLOC_004334 |
