RNA id: AMCG00004320


Basic Information

Item Value
RNA id AMCG00004320
length 504
RNA type mRNA
GC content 0.47
exon number 4
gene id AMCG00004320
representative True

Chromosome Information

Item Value
chromosome id CM030121.1
NCBI id CM030121.1
chromosome length 57050121
location 42689048 ~ 42691079 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

GATATTGCCCAGGGACGCTGCATACAGATACTGTACCTCTGAGCAACTTCATATCAACCTTTACCTCAGCACTTCTGCTCCCAGCATTTCCTTACATCTGCAACCATGGTCGACGCCTTCTGTGCCACCTGGAAACTGGTCGACAGTCAGAACTTTGACGAGTACATGAAAGCGCTGGGGGTTGGTTTTGCAACAAGACAAGTCGGCAACGTCACTAAACCCACTATCATCATCAGCCAGGATGGAGACAAGGTTGTTGTAAAAACGCAGAGtactttcaaaaatacagaaatttcCTTCAAACTTGGAGAGGAGTTCGATGAATCTACTGCAGACGACAGGAACTGCAAATCCACTGTATCCATGGACGGAGACAAGCTGGTGCATGTGCAGAAGTGGGACGGCAAGGAGACCAAGTTTGTCAGAGAGATCAAGGACGGCAAATTGATCATGAATCTGTCTTTCGGTGATGTCCAGGCAGTGCGTACTTATGAGAAGGCATAA

Function

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K08756 FABP7; fatty acid-binding protein 7, brain

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU8916 lncRNA downstream 375930 42312919 ~ 42313118 (-) True G7270
TU8914 lncRNA downstream 424071 42264690 ~ 42264977 (-) True G7268
TU8905 lncRNA downstream 468864 42219958 ~ 42220184 (-) True G7259
TU8884 lncRNA downstream 599421 42087804 ~ 42089627 (-) True G7243
TU8863 lncRNA downstream 621384 42066598 ~ 42067664 (-) True AMCG00004302
TU9007 lncRNA upstream 1675 42692754 ~ 42719691 (-) True G7335
TU9010 lncRNA upstream 34833 42725912 ~ 42737850 (-) True G7336
TU9118 lncRNA upstream 544739 43235818 ~ 43237610 (-) True G7419
TU9175 lncRNA upstream 711874 43402953 ~ 43428586 (-) True AMCG00004336
TU9174 lncRNA upstream 728772 43419851 ~ 43428586 (-) False AMCG00004336
AMCG00004317 mRNA downstream 1483 42679324 ~ 42687565 (-) True AMCG00004317
AMCG00004316 mRNA downstream 28441 42640409 ~ 42660607 (-) True AMCG00004316
AMCG00004313 mRNA downstream 158042 42377798 ~ 42531006 (-) False AMCG00004313
AMCG00004312 mRNA downstream 322113 42364767 ~ 42366935 (-) True AMCG00004312
AMCG00004311 mRNA downstream 327060 42355551 ~ 42361988 (-) True AMCG00004311
AMCG00004319 mRNA upstream 47424 42738503 ~ 42752817 (-) True AMCG00004319
AMCG00004323 mRNA upstream 209956 42901035 ~ 42901883 (-) True AMCG00004323
AMCG00004324 mRNA upstream 223063 42914142 ~ 42920194 (-) True AMCG00004324
AMCG00004322 mRNA upstream 231597 42922676 ~ 42925799 (-) True AMCG00004322
AMCG00004325 mRNA upstream 284673 42975752 ~ 43035278 (-) True AMCG00004325
TU8946 other downstream 309642 42376726 ~ 42379406 (-) True AMCG00004313
TU8320 other downstream 2839925 39841935 ~ 39849123 (-) True G6792
TU7893 other downstream 5320226 37367985 ~ 37368822 (-) True G6441
TU7345 other downstream 7274602 35354621 ~ 35414446 (-) False AMCG00004143
TU7292 other downstream 7725209 34960960 ~ 34963839 (-) False AMCG00004132
TU9361 other upstream 1829835 44520914 ~ 44522213 (-) True G7608
TU9683 other upstream 3615847 46306926 ~ 46307319 (-) True G7868
TU9698 other upstream 3777046 46468125 ~ 46468434 (-) True G7882
TU9761 other upstream 4193556 46884635 ~ 46887337 (-) False AMCG00004398
TU9801 other upstream 4368817 47059896 ~ 47306589 (-) False AMCG00004403

Expression Profile