RNA id: TU183314



Basic Information


Item Value
RNA id TU183314
length 211
lncRNA type inter_gene
GC content 0.33
exon number 1
gene id G145731
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 16914015 ~ 16914225 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


tgatggtAATGCTCAGCCTAAACTAAACACGTCATATATTAACTATACATTACTGTTATGCCAGCCCAAGCTATActatcttattttgttttacaaataattctGTATTTGTGGCATGGCTGATTAGATTATCATGCACTTCGGTGTCATTGTTGATATGGAATTGATGCTGAAATGAATACAGTCTTAAAACTAATTCAGTCAACCAGAT

Function


GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU183182 lncRNA upstream 682162 16229288 ~ 16231853 (+) True G145630
TU183140 lncRNA upstream 866821 16036612 ~ 16047194 (+) True G145593
TU183118 lncRNA upstream 959337 15953615 ~ 15954678 (+) True G145577
TU182931 lncRNA upstream 1656352 15255889 ~ 15257663 (+) True G145435
TU182914 lncRNA upstream 1669769 15242385 ~ 15244246 (+) True G145418
TU183329 lncRNA downstream 22602 16936827 ~ 16937075 (+) True G145744
TU183377 lncRNA downstream 99252 17013477 ~ 17013714 (+) True G145782
TU183378 lncRNA downstream 103743 17017968 ~ 17018375 (+) True G145783
TU183380 lncRNA downstream 117411 17031636 ~ 17031863 (+) True G145785
TU183381 lncRNA downstream 119782 17034007 ~ 17034245 (+) True G145786
AMCG00005145 mRNA upstream 980 16908199 ~ 16913035 (+) True AMCG00005145
AMCG00005146 mRNA upstream 10206 16890427 ~ 16903809 (+) True AMCG00005146
AMCG00005138 mRNA upstream 52439 16856385 ~ 16861576 (+) True AMCG00005138
AMCG00005135 mRNA upstream 155781 16750701 ~ 16758234 (+) True AMCG00005135
AMCG00005134 mRNA upstream 168369 16692897 ~ 16745646 (+) True AMCG00005134
AMCG00005147 mRNA downstream 47312 16961537 ~ 16969965 (+) True AMCG00005147
AMCG00005144 mRNA downstream 79586 16993811 ~ 16999021 (+) True AMCG00005144
AMCG00005160 mRNA downstream 197725 17111950 ~ 17116566 (+) True AMCG00005160
AMCG00005161 mRNA downstream 203438 17117663 ~ 17144393 (+) True AMCG00005161
AMCG00005155 mRNA downstream 448924 17363149 ~ 17392338 (+) True AMCG00005155
TU183002 other upstream 1529403 15384243 ~ 15384612 (+) False AMCG00005105
TU182286 other upstream 4132845 12780580 ~ 12781170 (+) True G144940
TU181952 other upstream 5250647 11662681 ~ 11663368 (+) True G144677
TU180912 other upstream 9183015 7729389 ~ 7731000 (+) False AMCG00004870
TU180621 other upstream 11489894 5423703 ~ 5424121 (+) True G143626
TU183561 other downstream 851032 17765257 ~ 17771525 (+) True G145932
TU184056 other downstream 2665348 19579573 ~ 19579807 (+) True G146305
TU184341 other downstream 3268129 20182354 ~ 20184643 (+) True G146519
TU184347 other downstream 3359288 20273513 ~ 20279786 (+) False AMCG00005272
TU184405 other downstream 3607424 20521649 ~ 20524819 (+) True G146575

Expression Profile