Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU183118 |
| length | 1037 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G145577 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 15953615 ~ 15954678 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0044444 | obsolete cytoplasmic part | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| id | description |
|---|---|
| ko04714 | Thermogenesis |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU182931 | lncRNA | upstream | 695952 | 15255889 ~ 15257663 (+) | True | G145435 |
| TU182914 | lncRNA | upstream | 709369 | 15242385 ~ 15244246 (+) | True | G145418 |
| TU182891 | lncRNA | upstream | 800876 | 15142484 ~ 15152739 (+) | True | G145398 |
| TU182866 | lncRNA | upstream | 825044 | 15126586 ~ 15128571 (+) | True | G145379 |
| TU182851 | lncRNA | upstream | 856603 | 15094969 ~ 15097012 (+) | True | G145369 |
| TU183140 | lncRNA | downstream | 81934 | 16036612 ~ 16047194 (+) | True | G145593 |
| TU183182 | lncRNA | downstream | 274610 | 16229288 ~ 16231853 (+) | True | G145630 |
| TU183314 | lncRNA | downstream | 959337 | 16914015 ~ 16914225 (+) | True | G145731 |
| TU183329 | lncRNA | downstream | 982149 | 16936827 ~ 16937075 (+) | True | G145744 |
| TU183377 | lncRNA | downstream | 1058799 | 17013477 ~ 17013714 (+) | True | G145782 |
| AMCG00005116 | mRNA | upstream | 198197 | 15753182 ~ 15755418 (+) | True | AMCG00005116 |
| AMCG00005117 | mRNA | upstream | 272887 | 15662094 ~ 15680728 (+) | True | AMCG00005117 |
| AMCG00005118 | mRNA | upstream | 291527 | 15642669 ~ 15662088 (+) | True | AMCG00005118 |
| AMCG00005119 | mRNA | upstream | 326356 | 15618611 ~ 15627259 (+) | True | AMCG00005119 |
| AMCG00005110 | mRNA | upstream | 461366 | 15465083 ~ 15492249 (+) | True | AMCG00005110 |
| AMCG00005120 | mRNA | downstream | 25161 | 15979839 ~ 15991378 (+) | True | AMCG00005120 |
| AMCG00005122 | mRNA | downstream | 38688 | 15993366 ~ 16006829 (+) | True | AMCG00005122 |
| AMCG00005121 | mRNA | downstream | 83533 | 16038211 ~ 16043140 (+) | True | AMCG00005121 |
| AMCG00005131 | mRNA | downstream | 109274 | 16063952 ~ 16101489 (+) | True | AMCG00005131 |
| AMCG00005132 | mRNA | downstream | 151949 | 16106627 ~ 16158958 (+) | True | AMCG00005132 |
| TU183002 | other | upstream | 569003 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU182286 | other | upstream | 3172445 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU181952 | other | upstream | 4290247 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU180912 | other | upstream | 8222615 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 10529494 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU183561 | other | downstream | 1810579 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 3624895 | 19579573 ~ 19579807 (+) | True | G146305 |
| TU184341 | other | downstream | 4227676 | 20182354 ~ 20184643 (+) | True | G146519 |
| TU184347 | other | downstream | 4318835 | 20273513 ~ 20279786 (+) | False | AMCG00005272 |
| TU184405 | other | downstream | 4566971 | 20521649 ~ 20524819 (+) | True | G146575 |
