Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU182866 |
| length | 1114 |
| lncRNA type | inter_gene |
| GC content | 0.35 |
| exon number | 5 |
| gene id | G145379 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030140.1 |
| NCBI id | CM030140.1 |
| chromosome length | 22460246 |
| location | 15126586 ~ 15128571 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0042692 | muscle cell differentiation | biological_process |
| GO:0051146 | striated muscle cell differentiation | biological_process |
| GO:0055003 | cardiac myofibril assembly | biological_process |
| GO:0055004 | atrial cardiac myofibril assembly | biological_process |
| GO:0055006 | cardiac cell development | biological_process |
| GO:0055011 | atrial cardiac muscle cell differentiation | biological_process |
| GO:0055013 | cardiac muscle cell development | biological_process |
| GO:0055014 | atrial cardiac muscle cell development | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU182851 | lncRNA | upstream | 29574 | 15094969 ~ 15097012 (+) | True | G145369 |
| TU182778 | lncRNA | upstream | 151200 | 14973110 ~ 14975386 (+) | True | G145307 |
| TU182742 | lncRNA | upstream | 265430 | 14838584 ~ 14861156 (+) | True | G145278 |
| TU182745 | lncRNA | upstream | 273845 | 14846088 ~ 14852741 (+) | True | G145281 |
| TU182730 | lncRNA | upstream | 335459 | 14778238 ~ 14791127 (+) | True | G145268 |
| TU182891 | lncRNA | downstream | 13913 | 15142484 ~ 15152739 (+) | True | G145398 |
| TU182914 | lncRNA | downstream | 113814 | 15242385 ~ 15244246 (+) | True | G145418 |
| TU182931 | lncRNA | downstream | 127318 | 15255889 ~ 15257663 (+) | True | G145435 |
| TU183118 | lncRNA | downstream | 825044 | 15953615 ~ 15954678 (+) | True | G145577 |
| TU183140 | lncRNA | downstream | 908041 | 16036612 ~ 16047194 (+) | True | G145593 |
| AMCG00005086 | mRNA | upstream | 15320 | 15108883 ~ 15111266 (+) | True | AMCG00005086 |
| AMCG00005084 | mRNA | upstream | 34122 | 15086784 ~ 15092464 (+) | True | AMCG00005084 |
| AMCG00005096 | mRNA | upstream | 48417 | 15057323 ~ 15078169 (+) | True | AMCG00005096 |
| AMCG00005094 | mRNA | upstream | 85321 | 15038438 ~ 15041265 (+) | True | AMCG00005094 |
| AMCG00005095 | mRNA | upstream | 123479 | 14998337 ~ 15003107 (+) | True | AMCG00005095 |
| AMCG00005085 | mRNA | downstream | 3161 | 15131732 ~ 15150390 (+) | True | AMCG00005085 |
| AMCG00005091 | mRNA | downstream | 68463 | 15197034 ~ 15200130 (+) | True | AMCG00005091 |
| AMCG00005090 | mRNA | downstream | 72275 | 15200846 ~ 15242199 (+) | True | AMCG00005090 |
| AMCG00005104 | mRNA | downstream | 129826 | 15258397 ~ 15284450 (+) | True | AMCG00005104 |
| AMCG00005103 | mRNA | downstream | 180519 | 15309090 ~ 15309877 (+) | True | AMCG00005103 |
| TU182286 | other | upstream | 2345416 | 12780580 ~ 12781170 (+) | True | G144940 |
| TU181952 | other | upstream | 3463218 | 11662681 ~ 11663368 (+) | True | G144677 |
| TU180912 | other | upstream | 7395586 | 7729389 ~ 7731000 (+) | False | AMCG00004870 |
| TU180621 | other | upstream | 9702465 | 5423703 ~ 5424121 (+) | True | G143626 |
| TU180426 | other | upstream | 10754497 | 4371709 ~ 4372089 (+) | True | G143471 |
| TU183002 | other | downstream | 255672 | 15384243 ~ 15384612 (+) | False | AMCG00005105 |
| TU183561 | other | downstream | 2636686 | 17765257 ~ 17771525 (+) | True | G145932 |
| TU184056 | other | downstream | 4451002 | 19579573 ~ 19579807 (+) | True | G146305 |
| TU184341 | other | downstream | 5053783 | 20182354 ~ 20184643 (+) | True | G146519 |
| TU184347 | other | downstream | 5144942 | 20273513 ~ 20279786 (+) | False | AMCG00005272 |
