RNA id: AMCG00005103



Basic Information


Item Value
RNA id AMCG00005103
length 339
RNA type mRNA
GC content 0.45
exon number 2
gene id AMCG00005103
representative True

Chromosome Information


Item Value
chromosome id CM030140.1
NCBI id CM030140.1
chromosome length 22460246
location 15309090 ~ 15309877 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGCACCCAAGCACACTTTGCCTCTTCCTTTTAATCAGTGGAAATTTAATAGAAGATGTTATGGGTTATCCTAATGGTGCAGTTACTGCTGCGTGCACCGACATGAAACCAATTCATCAGTCTTTTACTGCCCAGAGTTCAACTTCTCCATTTCGTATAACTGCAAGTAAATCCACGTATTCTCCGGGAGATGAAATCACAGtgacaCTTCAAACTTCATCCGTTCCTTTCGAGGGATTCCTATTACAGGCTCGGACGATTGGAGGAGTTAGTGCAGTTGGGCTTTTCACCCCCTTAAACCTTACGGAGTCTCAAGGACTGAGCTGTAACGGTGTGGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU182931 lncRNA upstream 51427 15255889 ~ 15257663 (+) True G145435
TU182914 lncRNA upstream 64844 15242385 ~ 15244246 (+) True G145418
TU182891 lncRNA upstream 156351 15142484 ~ 15152739 (+) True G145398
TU182866 lncRNA upstream 180519 15126586 ~ 15128571 (+) True G145379
TU182851 lncRNA upstream 212078 15094969 ~ 15097012 (+) True G145369
TU183118 lncRNA downstream 643738 15953615 ~ 15954678 (+) True G145577
TU183140 lncRNA downstream 726735 16036612 ~ 16047194 (+) True G145593
TU183182 lncRNA downstream 919411 16229288 ~ 16231853 (+) True G145630
TU183314 lncRNA downstream 1604138 16914015 ~ 16914225 (+) True G145731
TU183329 lncRNA downstream 1626950 16936827 ~ 16937075 (+) True G145744
AMCG00005104 mRNA upstream 24640 15258397 ~ 15284450 (+) True AMCG00005104
AMCG00005090 mRNA upstream 66891 15200846 ~ 15242199 (+) True AMCG00005090
AMCG00005091 mRNA upstream 108960 15197034 ~ 15200130 (+) True AMCG00005091
AMCG00005085 mRNA upstream 158700 15131732 ~ 15150390 (+) True AMCG00005085
AMCG00005086 mRNA upstream 197824 15108883 ~ 15111266 (+) True AMCG00005086
AMCG00005102 mRNA downstream 27391 15337268 ~ 15347378 (+) True AMCG00005102
AMCG00005105 mRNA downstream 69722 15379599 ~ 15384811 (+) True AMCG00005105
AMCG00005110 mRNA downstream 155206 15465083 ~ 15492249 (+) True AMCG00005110
AMCG00005119 mRNA downstream 308734 15618611 ~ 15627259 (+) True AMCG00005119
AMCG00005118 mRNA downstream 332792 15642669 ~ 15662088 (+) True AMCG00005118
TU182286 other upstream 2527920 12780580 ~ 12781170 (+) True G144940
TU181952 other upstream 3645722 11662681 ~ 11663368 (+) True G144677
TU180912 other upstream 7578090 7729389 ~ 7731000 (+) False AMCG00004870
TU180621 other upstream 9884969 5423703 ~ 5424121 (+) True G143626
TU180426 other upstream 10937001 4371709 ~ 4372089 (+) True G143471
TU183002 other downstream 74366 15384243 ~ 15384612 (+) False AMCG00005105
TU183561 other downstream 2455380 17765257 ~ 17771525 (+) True G145932
TU184056 other downstream 4269696 19579573 ~ 19579807 (+) True G146305
TU184341 other downstream 4872477 20182354 ~ 20184643 (+) True G146519
TU184347 other downstream 4963636 20273513 ~ 20279786 (+) False AMCG00005272

Expression Profile