RNA id: AMCG00006924



Basic Information


Item Value
RNA id AMCG00006924
length 276
RNA type mRNA
GC content 0.56
exon number 2
gene id AMCG00006924
representative True

Chromosome Information


Item Value
chromosome id CM030134.1
NCBI id CM030134.1
chromosome length 29342575
location 26184251 ~ 26185762 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


ATGGCTGCGGAAGGGATACTGCAAAGTGTGGATCACTATAAAGCGGAGATCGAGCGGCTGAGACGGGAGCTTTCGGAAACCACCCAGGAGAAGATCAGGGCTGCGGAGTGCGGGCTGGTGGTGCTAGATGAGAACCAGTCCCTGAAGCAGCAGTACACGGACCTGGAGGCTGAGCATGAGACCCTCAAACAGGAACTGGAGCAGCTCAAAGAGGTAACTGCCAGACAGAGCACAGTGCTGGCAGGCTTTAATGGCAAGTGCTGGAAACGgctgtga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU142110 lncRNA downstream 145928 26001446 ~ 26038323 (-) True G113479
TU142114 lncRNA downstream 173752 26001446 ~ 26010499 (-) False G113479
TU142099 lncRNA downstream 188322 25995641 ~ 25995929 (-) True G113468
TU142052 lncRNA downstream 316972 25866385 ~ 25867279 (-) True G113431
TU142000 lncRNA downstream 438266 25741068 ~ 25745985 (-) True G113395
TU142233 lncRNA upstream 873607 27059369 ~ 27059594 (-) True G113573
TU142246 lncRNA upstream 969773 27155535 ~ 27155857 (-) True G113586
TU142247 lncRNA upstream 979417 27165179 ~ 27165398 (-) True G113587
TU142308 lncRNA upstream 1084697 27270459 ~ 27363030 (-) True G113631
TU142352 lncRNA upstream 1614176 27799938 ~ 27800294 (-) True G113667
AMCG00006925 mRNA downstream 43432 26134171 ~ 26140819 (-) True AMCG00006925
AMCG00006923 mRNA downstream 78865 26092897 ~ 26105386 (-) True AMCG00006923
AMCG00006922 mRNA downstream 191146 25976490 ~ 25993105 (-) True AMCG00006922
AMCG00006918 mRNA downstream 235124 25937707 ~ 25949127 (-) True AMCG00006918
AMCG00006919 mRNA downstream 272669 25899551 ~ 25911582 (-) True AMCG00006919
AMCG00006926 mRNA upstream 6627 26192389 ~ 26361451 (-) True AMCG00006926
AMCG00006929 mRNA upstream 422781 26608543 ~ 26639948 (-) True AMCG00006929
AMCG00006932 mRNA upstream 1123130 27308892 ~ 27309170 (-) True AMCG00006932
AMCG00006935 mRNA upstream 1451458 27637220 ~ 27649919 (-) True AMCG00006935
AMCG00006934 mRNA upstream 1483024 27668786 ~ 27677200 (-) True AMCG00006934
TU141596 other downstream 2777044 23404175 ~ 23407207 (-) True G113050
TU140946 other downstream 5234415 20854057 ~ 20949836 (-) False AMCG00006813
TU140776 other downstream 5948045 20235856 ~ 20236206 (-) True G112420
TU140642 other downstream 6548326 19633237 ~ 19635925 (-) False AMCG00006774
TU140430 other downstream 7843041 18339270 ~ 18341210 (-) False AMCG00006754
TU142176 other upstream 314253 26500015 ~ 26500681 (-) True G113530
TU142323 other upstream 1216838 27402600 ~ 27527348 (-) True G113645
TU142485 other upstream 2081500 28267262 ~ 28292598 (-) False G113775
TU142484 other upstream 2105693 28291455 ~ 28292598 (-) True G113775
TU142549 other upstream 2525457 28711219 ~ 28812548 (-) True G113833

Expression Profile