RNA id: AMCG00009503


Basic Information

Item Value
RNA id AMCG00009503
length 3358
RNA type mRNA
GC content 0.50
exon number 8
gene id AMCG00009503
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 39967297 ~ 39982047 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

gcgagagagagagagagagagagagaactccCAGCATAAAGAGAGGAGTTTCCTGACTGCAACTCACAGTGACACAGAAACCACAAACGAAGGAGCGTGCTTTAAATCTTTCCAGCCTGAGTACAACACATTGACAGAAATACAGCCCCCACAGTCTGGAAGTGCACAGACCTGGATACCTGCCTGGAGGGAGCAGACCTGGCACTGGAGAAACCAATTACAGACAGCGGAGGAAAACTGAGGAAGGAGATGCGTGCAATTTCTGAAGGGGTCTCCAGAGCTCTGCCCCGGTGTTGCAGCCACCTGTTTGGGATCATTTTGATCACCTGCTGAAAAGCAgaagggtggtggtggtggtagggtggtggggggagcgGAGAGAGgggtctctctctcgctctctctttgtttttctggcAAAGCAGTAGAAGTTTTGAGAGCGGGAAAAAGGATTTCAATCCACGTGTTCAAGAAATGAGGGACAGACACAGGGGCTGTGGTGCCGGGAAATGAAAAGGAGGGCAGAGCAAGGAGGGACAGGACCACCACAGACTGGGACGCGacaagagagcaagagagagagacacaggcaAGAGGACAACACGACCCCCTTGGGCGGGAGAATGGGAGCATAGCAGGGACACAGAAGGACAGAGAAAGAGCTGAGCACCCAGAGAGGGACAGAGCAACTCGCAGAGATAGAGAGAACAGGGGACGAACACCCGGACACATCCGCCCACCTCGGACTGGCGTTCTCAGAGATGCCCAGCGTGAGGCAGGTTGGCGCTGAGGGGGCAGCCGTGTGGGGCACGTGTGGGGCCGTGGGGAGGAGACCCCTACGCTGGCTGCTGATGCCTCTGCTCTGTGCCCTGCTGCTGTCAGAGGGCAGAGCAGAGAGGGGCAAAACTGAGGGGATACCCAGAGAGACTGCCACCCAAGTGTATCACAACAGCCCGGAGTCAGAAACGTCCGACGGCTTGGTCAACCCCAGAAAGTCCTGGATGGTCTTTATCAAGAACTCTGACAAGGGGGTGAATGGCAAAGGGAAGCACCCTGGGAAAAACAAACTCAAGCATGGTTTGCCCGGTCCCCCAGGACCTCCCGGCCCGCCGGGGCCCCCTGGCATCCCTGCCACGTCCCTCGCCAAGGAGGAACTGATGCAGCAGTTCCGAATCTTGCTTGAAGAGGCCACAGCGAACAGGAGTACCCTGGAGCTGAGCGTGCGCTGCCCTCTGTGTGAGGACAGGGTGGAGGCAGAGAAGGGGACACGGGCGGGGCCAGGCGAGGCGGAAGGGCCCCCTGGGTTGGCTGAACCATACCCACGAGTGGGCACGGCCTTCCACTGCCGCCTACGGGACAGCCTGGCGGTTCGACGTCGCAGTCTGCTGGAGCTACAGCCGTTCGCCAGCCCTCCAGAAACTGAGAGTCACTTCCAGCGAGGGCAGGGCTTCAACATCAGCACAGGCCGCTACACGGCGCCGGTCTCCGGATTCTACCAGCTGACCGCCAGCCTGCTCATTGAGCACAGCGAGTCTCCAAGACGAGCCCAGGCCCGGCCACGCGACTGCGTCCGAGCCTTCATCTGCATCGAGTCGCTGTGCCACAGCAACATGTCTTTAGAGGCAGTAGCCGGAACTGGGTCTGCTGGGAGCCTTTTCACTGTACTGGTCACAGGCACGCTCTACCTTCAGgCAGGTGAATATGTGTCGGTCTTTGTTGATAATGGCACCGGCTCGGCCTTCACTGTCCAGAAGGGGACGCTCTTCTCTGGGGTCCTGCTGGGTGTCTGACCCTGCCCATCACCCTCACACTGGACGCCGGACACGGGGGATCCGTATTTGTATCGCGCTGCTTGTTGTACTGCTTTATTATGGACTTCTACGAAAATAATTGGACTGATCTACCAACACTTGCCCTGCTTTGTTTCTGCTTTGCACATGTTCTCCCCGACGACAGCAAGTTTGGCGACGGTCTTAtcgtttgttcactgaagggggAAGAGACTCGAGATTCAGAAAGAGACCTGTTCCAGGCCGAGCTCGGGGGGTATTTATTGGCGGTACAGCTGGGACTTGATGACCTGAGCTCTTCCAACCGAAGACAGTCTTAAAAGGAGAATAATTAAGGTTTTTTCACAGGACAGAACTGTAATATcctgtgattaaaaaataaatgactgaagaaacacaaaaatacatacaaatgatatatatatagatcctaaaaaacaacagtaacaacaatGCAGGACTTGACAGCGGAGGCCATGCAATGTTTTAATAAGGATTTTTCAGAAAAGAGTCGTTTCAAAATCGACAAAACTGCTGAAGAAGGCAGTTCTGTTTTGGAACTGTTTGGAAAGAtggaaagtaaataataatctgGGAACAGAGTGGAATTGTACCTGGAGAGGTGTGGGGCTGTGTGGAGGTCCCCGGAGGGGCCTGTGAGAGCCGAACGAGTCCTTCAGGCCGGCCAGCGTCTGCGGTCTCCTGGCAGCCACGGACCAGCCCGTCACTCCACTGGACTGTCTCCAAAGCAACCTCTCTTCCAGCTCTGGGACGCTTGTGTGACTGCATAACCGGGCTGCTGTTATTAAGTTATGATTGTAAATAGATGGAAATGGCTTTAAAACTAATGTATaaagagatgtattttttttcctccaactTCTACACTGATTTGACATAATTAAGCATCTAACAAACCAAATAAAGAGCCTATATTTATTGCTTTTGAATCTGAATTATTAATACaagtatatacagctctggaaaaaattaagagaccactccaagttcagaaatcaatgttatttttttccagagctgtatatgtggATGTTTCTGGAACATTACTGTAATTTGGTAATAAACATATCATTTAGCTACACAGATCTTTAATTGAAGGATTATGAAAGTGACAGGCAACATTACAGACAGTCAGACAACATATCGTTTTAATGCTCTTCTCGTTTGTGATTCTAGATATTATACTGGCAAATGTTAGAGGAATCTGCATTGTTTACCAGTGGATGTTACACACTGATTCCATAATTATATGTCACTGAGTAATTTCAGGTCAcacaggaagagaaacagacTCCTGCCTCCATCCTTAATTCAAATGTTCCCCCCTGGAaattaaaaggattaaaaaatgaaataaaactgatgCTGTCAAGCTAGTCCTTAACACTATAGTCAAAGTGTTTGGACTGCTTTAgagttgaagaaaaaaacaaaaaactccttgtttttgtctttcgCTTCCaattatagtttgtttttcctttcacagaGCAAGACGCCAGCATGCCAACTTCCCTGTTTCAAAACCCTCATAACTTAAGTCCAAA

Function

GO: NA

KEGG:

id description
K24381 ERFE, FAM132B; erythroferrone

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU71800 lncRNA upstream 24261 39941222 ~ 39943036 (+) True G57428
TU71769 lncRNA upstream 92127 39874881 ~ 39875170 (+) True G57401
TU71734 lncRNA upstream 160369 39806583 ~ 39806928 (+) True G57378
TU71673 lncRNA upstream 507621 39459398 ~ 39459676 (+) True G57329
TU71627 lncRNA upstream 660523 39306488 ~ 39306774 (+) True G57287
TU71839 lncRNA downstream 48499 40030546 ~ 40033333 (+) True G57457
TU71932 lncRNA downstream 177362 40159409 ~ 40159626 (+) True G57523
TU71954 lncRNA downstream 357335 40339382 ~ 40343381 (+) True G57544
TU72028 lncRNA downstream 847025 40829072 ~ 40829677 (+) True G57597
TU72030 lncRNA downstream 950920 40932967 ~ 40933210 (+) True G57599
AMCG00009505 mRNA upstream 29016 39930146 ~ 39938281 (+) True AMCG00009505
AMCG00009506 mRNA upstream 37164 39922934 ~ 39930133 (+) True AMCG00009506
AMCG00009504 mRNA upstream 45189 39884002 ~ 39922108 (+) True AMCG00009504
AMCG00009498 mRNA upstream 94575 39865728 ~ 39872722 (+) True AMCG00009498
AMCG00009495 mRNA upstream 104116 39845409 ~ 39863181 (+) True AMCG00009495
AMCG00009510 mRNA downstream 40034 40022081 ~ 40025439 (+) True AMCG00009510
AMCG00009512 mRNA downstream 46745 40028792 ~ 40029460 (+) True AMCG00009512
AMCG00009509 mRNA downstream 89192 40071239 ~ 40072287 (+) True AMCG00009509
AMCG00009516 mRNA downstream 104427 40086474 ~ 40105052 (+) True AMCG00009516
AMCG00009515 mRNA downstream 158422 40140469 ~ 40142280 (+) True AMCG00009515
TU71802 other upstream 18097 39948006 ~ 39949200 (+) True G57430
TU71670 other upstream 530302 39434900 ~ 39436995 (+) True AMCG00009480
TU71381 other upstream 1509705 38442255 ~ 38457592 (+) True G57105
TU71113 other upstream 2351014 37610343 ~ 37616283 (+) False AMCG00009428
TU70945 other upstream 2599626 37360101 ~ 37367671 (+) True AMCG00009405
TU71881 other downstream 120336 40102383 ~ 40104948 (+) False AMCG00009516
TU72035 other downstream 1008755 40990802 ~ 40994659 (+) True G57604
TU72303 other downstream 2053971 42036018 ~ 42078241 (+) True G57830
TU72919 other downstream 3950905 43932952 ~ 43935762 (+) True G58324
TU73161 other downstream 4404450 44386497 ~ 44387964 (+) False G58522

Expression Profile