Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00009512 |
| length | 669 |
| RNA type | mRNA |
| GC content | 0.62 |
| exon number | 1 |
| gene id | AMCG00009512 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 40028792 ~ 40029460 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0016192 | vesicle-mediated transport | biological_process |
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU71800 | lncRNA | upstream | 85756 | 39941222 ~ 39943036 (+) | True | G57428 |
| TU71769 | lncRNA | upstream | 153622 | 39874881 ~ 39875170 (+) | True | G57401 |
| TU71734 | lncRNA | upstream | 221864 | 39806583 ~ 39806928 (+) | True | G57378 |
| TU71673 | lncRNA | upstream | 569116 | 39459398 ~ 39459676 (+) | True | G57329 |
| TU71627 | lncRNA | upstream | 722018 | 39306488 ~ 39306774 (+) | True | G57287 |
| TU71839 | lncRNA | downstream | 1086 | 40030546 ~ 40033333 (+) | True | G57457 |
| TU71932 | lncRNA | downstream | 129949 | 40159409 ~ 40159626 (+) | True | G57523 |
| TU71954 | lncRNA | downstream | 309922 | 40339382 ~ 40343381 (+) | True | G57544 |
| TU72028 | lncRNA | downstream | 799612 | 40829072 ~ 40829677 (+) | True | G57597 |
| TU72030 | lncRNA | downstream | 903507 | 40932967 ~ 40933210 (+) | True | G57599 |
| AMCG00009510 | mRNA | upstream | 3353 | 40022081 ~ 40025439 (+) | True | AMCG00009510 |
| AMCG00009503 | mRNA | upstream | 46745 | 39967297 ~ 39982047 (+) | True | AMCG00009503 |
| AMCG00009505 | mRNA | upstream | 90511 | 39930146 ~ 39938281 (+) | True | AMCG00009505 |
| AMCG00009506 | mRNA | upstream | 98659 | 39922934 ~ 39930133 (+) | True | AMCG00009506 |
| AMCG00009504 | mRNA | upstream | 106684 | 39884002 ~ 39922108 (+) | True | AMCG00009504 |
| AMCG00009509 | mRNA | downstream | 41779 | 40071239 ~ 40072287 (+) | True | AMCG00009509 |
| AMCG00009516 | mRNA | downstream | 57014 | 40086474 ~ 40105052 (+) | True | AMCG00009516 |
| AMCG00009515 | mRNA | downstream | 111009 | 40140469 ~ 40142280 (+) | True | AMCG00009515 |
| AMCG00009514 | mRNA | downstream | 143506 | 40172966 ~ 40179050 (+) | True | AMCG00009514 |
| AMCG00009525 | mRNA | downstream | 159681 | 40189141 ~ 40203113 (+) | True | AMCG00009525 |
| TU71802 | other | upstream | 79592 | 39948006 ~ 39949200 (+) | True | G57430 |
| TU71670 | other | upstream | 591797 | 39434900 ~ 39436995 (+) | True | AMCG00009480 |
| TU71381 | other | upstream | 1571200 | 38442255 ~ 38457592 (+) | True | G57105 |
| TU71113 | other | upstream | 2412509 | 37610343 ~ 37616283 (+) | False | AMCG00009428 |
| TU70945 | other | upstream | 2661121 | 37360101 ~ 37367671 (+) | True | AMCG00009405 |
| TU71881 | other | downstream | 72923 | 40102383 ~ 40104948 (+) | False | AMCG00009516 |
| TU72035 | other | downstream | 961342 | 40990802 ~ 40994659 (+) | True | G57604 |
| TU72303 | other | downstream | 2006558 | 42036018 ~ 42078241 (+) | True | G57830 |
| TU72919 | other | downstream | 3903492 | 43932952 ~ 43935762 (+) | True | G58324 |
| TU73161 | other | downstream | 4357037 | 44386497 ~ 44387964 (+) | False | G58522 |
