RNA id: AMCG00009779


Basic Information

Item Value
RNA id AMCG00009779
length 1793
RNA type mRNA
GC content 0.57
exon number 11
gene id AMCG00009779
representative True

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 45897094 ~ 45905338 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

cacacacacacacacacacacacacacagcagtgaacGGTGCCgctgctctgtctctctctcaccgtgCCTCCGTCTCTCGGCTTCGGCCTCGTCTGCTACGTGTCAGTCGGCTGCGGTCCCGCACTGTTGCGTGGAGCGGAATGAAAGCAGCCCCATCGCCCCGCTCTGCAGGAGACCGGTACCTCAGCCCCAGCGGCGCCCGCAGTCAGTGTGCAGCAGGAGGCTCAACACCGTGAAGGATATCGCGGCGGCTGCAAAACCGTGTACCTCCGTGCCATAGACATCAGATCTGCGCTCCATCCCGCATACACTCGGTCTGTCAACATGGCGCCCTCCTTCTCGGTACTGGCCGCGTCCAGGCTGCTTCGGCCGGCGCTTTCCGCTCGGCTCGGCCCGGTAAAGGTGTTCGGAGGGGCCGCTGCAGTGTCCAGTACCCGGGACAAATCGACCTACACAGTGAGTCCCCCCCCAGCGAAGTACGGCGGGCGGCACACGGTGACGCTGATCCCAGGCGACGGCATCGGGCCCGAGCTGCTGAGCCACGTCCGGGAGCTGTTCAGGTTCTGCTGCGTGCCGGTGGATTTCGAGGTGGTGAACGTGAACTCCGCCATGACGGAGGAGGATGACATCAACAACGCCATCACCGCCATCCGCCGCAACTGGGTTGCACTCAAAGGCAACATCGAGACCAACCACACCATGCCCCCCTCCCACAAGTCCAGGAACAACCTGCTGCGTACCAGTCTGGACCTGTATGCCAATGTGATCCACTGCCAGAGTCTGCCGGGGGTCCAGACGCGACATCGCAACATTGACATCATGATCATCAGAGAGAACACGGAGGGGGAGTACAGCAACCTGGAGCACGAGAAAGGTCGCCGCAGGGTCACGGCCGTGCACAAGGCCAACATCAtGAAGCTGGGGGACGGGCTGTTCCTGCAGTGCTGCCGGGAGGTGGCGTCGGGCTACCCTGACATCGCCTTCGACAGCATGATCGTGGACAACACCACCATGCAGctGGTCTCGAAGCCGCAGCAGTTTGATGTCATGGTGATGCCCAATCTGTATGGCAACGTGGTGAGCAACGTGTGCGCCGGGCTGGTAGGGGGGCCTGGGCTCGTCCCCGGGGCAAACTATGGCCGGAACTACGCCGTCTTTGAGACCCTGCACACGGCTGACATCGGGGGTCAGGGCACGACTTCAGAGGTGGTCCAGTCCATCATGAGGCAGATCCAGAGCAGCGGCCCACAGACCACTGAGGCCTACTGAGCACACAGGTAACCCTGAGCACACAGTGGTAACACTGAATGGAGTTACAACTGAACACTGGTATCACTGATAACAGGTGACTCCTGAACATACACACAAAGTTGACTGTGAGTACTGAGCACACAGgtaaaactctctctctctccccctctcccccaggaGGACTGCTGTTCCACagatgtgtgactgtgtgtgttcttgtgtgtctgtatactgattgacacacaacacacacgccTGTTTGTATCAGGAAAATCCAGCCGCCACTTTCATTTtactttctctttttatttattaggacTCTTTGCTGCCTAGATATTTAATGGATCGATGGGTGCgggaaatattatttttgtattgttatgttATTCAGAGTTTAGCATGGCAGTTCGCCATTCCTATGCATCATGACCAAGTTACATTACTGTGTGTGGGGAGgtcctgctgctgtgtgtgtcattgtgtaaAAGCTCATTAACCTCTCCAGTTCCAATAAAGGAAGTCTAAAATATAAAGGTGCAA

Function

GO: NA

KEGG:

id description
K00030 IDH3; isocitrate dehydrogenase (NAD+)

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU73869 lncRNA downstream 133954 45759711 ~ 45763140 (-) True G59099
TU73855 lncRNA downstream 146121 45750106 ~ 45750973 (-) False AMCG00009769
TU73857 lncRNA downstream 148636 45747557 ~ 45748458 (-) True G59090
TU73841 lncRNA downstream 150840 45745941 ~ 45746254 (-) True G59077
TU73798 lncRNA downstream 216974 45675703 ~ 45680120 (-) True G59042
TU74008 lncRNA upstream 1916 45907254 ~ 45908142 (-) True G59191
TU74023 lncRNA upstream 3243 45908581 ~ 45915868 (-) True G59202
TU74025 lncRNA upstream 3243 45908581 ~ 45964055 (-) False G59202
TU74073 lncRNA upstream 156155 46061493 ~ 46112681 (-) True G59236
TU74082 lncRNA upstream 216937 46122275 ~ 46175968 (-) True G59244
AMCG00009774 mRNA downstream 27359 45865900 ~ 45869735 (-) True AMCG00009774
AMCG00009775 mRNA downstream 85210 45801402 ~ 45811884 (-) True AMCG00009775
AMCG00009777 mRNA downstream 97146 45782243 ~ 45799948 (-) True AMCG00009777
AMCG00009776 mRNA downstream 115881 45774869 ~ 45781213 (-) True AMCG00009776
AMCG00009773 mRNA downstream 125845 45763177 ~ 45771249 (-) True AMCG00009773
AMCG00009783 mRNA upstream 127776 46033114 ~ 46052896 (-) True AMCG00009783
AMCG00009788 mRNA upstream 223772 46129110 ~ 46151694 (-) True AMCG00009788
AMCG00009787 mRNA upstream 256933 46162271 ~ 46166818 (-) True AMCG00009787
AMCG00009790 mRNA upstream 264427 46169765 ~ 46172501 (-) True AMCG00009790
AMCG00009789 mRNA upstream 271912 46177250 ~ 46182945 (-) True AMCG00009789
TU73631 other downstream 573144 45320843 ~ 45323950 (-) True AMCG00009748
TU73632 other downstream 573772 45320843 ~ 45323322 (-) False AMCG00009748
TU73318 other downstream 1111960 44782918 ~ 44785134 (-) True G58653
TU73240 other downstream 1330260 44566069 ~ 44566834 (-) True G58589
TU73235 other downstream 1354285 44541894 ~ 44542809 (-) True G58584

Expression Profile