RNA id: TU131891


Basic Information

Item Value
RNA id TU131891
length 230
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G105448
representative True

Chromosome Information

Item Value
chromosome id CM030133.1
NCBI id CM030133.1
chromosome length 32682731
location 16132758 ~ 16132987 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

CATGGGACTATCCTTATTTTGACACGTTTTatcatatttttccattttatattttttgtataattgtaacCATATTTTACCACATTGTTACTATGtttttaccatgctacaccacactacactgcacCTTACTGTATTTTACCACAGTTCACTACACTTCAATCTATATTTGGCCCATGGTCCCGTATGACATGTCCTCCTCCCTTAGACACGTTTAAGCTGCATTCGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU131886 lncRNA upstream 22377 16105586 ~ 16110381 (+) True AMCG00011268
TU131881 lncRNA upstream 65316 16067233 ~ 16067442 (+) True G105438
TU131879 lncRNA upstream 69009 16062914 ~ 16063749 (+) True G105436
TU131877 lncRNA upstream 76309 16056165 ~ 16056449 (+) True G105434
TU131821 lncRNA upstream 135026 15996377 ~ 15997732 (+) True G105390
TU131909 lncRNA downstream 67062 16200049 ~ 16200299 (+) True G105466
TU131997 lncRNA downstream 591701 16724688 ~ 16725153 (+) True G105538
TU132204 lncRNA downstream 1176772 17309759 ~ 17312068 (+) True G105684
TU132235 lncRNA downstream 1245633 17378620 ~ 17378860 (+) True G105715
TU132287 lncRNA downstream 1602003 17734990 ~ 17742387 (+) True G105756
AMCG00011270 mRNA upstream 8067 16119868 ~ 16124691 (+) True AMCG00011270
AMCG00011268 mRNA upstream 26372 16105650 ~ 16106386 (+) False AMCG00011268
AMCG00011262 mRNA upstream 99733 16031074 ~ 16033025 (+) True AMCG00011262
AMCG00011258 mRNA upstream 178981 15948639 ~ 15953777 (+) True AMCG00011258
AMCG00011255 mRNA upstream 259269 15863039 ~ 15873489 (+) True AMCG00011255
AMCG00011269 mRNA downstream 465 16133452 ~ 16141505 (+) True AMCG00011269
AMCG00011267 mRNA downstream 10852 16143839 ~ 16148914 (+) True AMCG00011267
AMCG00011276 mRNA downstream 100618 16233605 ~ 16240750 (+) True AMCG00011276
AMCG00011275 mRNA downstream 110340 16243327 ~ 16247084 (+) True AMCG00011275
AMCG00011278 mRNA downstream 293027 16426014 ~ 16427017 (+) True AMCG00011278
TU131803 other upstream 148679 15963340 ~ 15984079 (+) True G105373
TU131793 other upstream 276974 15853764 ~ 15855784 (+) True AMCG00011252
TU131792 other upstream 280369 15850646 ~ 15852389 (+) True AMCG00011253
TU131632 other upstream 810333 15320780 ~ 15322425 (+) False AMCG00011241
TU131514 other upstream 1512224 14619690 ~ 14620534 (+) True G105139
TU132132 other downstream 845505 16978492 ~ 16982241 (+) True AMCG00011293
TU132321 other downstream 1651176 17784163 ~ 17788050 (+) True G105778
TU132460 other downstream 2979923 19112910 ~ 19117369 (+) True AMCG00011328
TU132491 other downstream 3089068 19222055 ~ 19222421 (+) True G105916
TU132810 other downstream 3962242 20095229 ~ 20162966 (+) False G106139

Expression Profile