Gene
RNA
| Item | Value |
|---|---|
| RNA id | AMCG00011269 |
| length | 930 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 7 |
| gene id | AMCG00011269 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030133.1 |
| NCBI id | CM030133.1 |
| chromosome length | 32682731 |
| location | 16133452 ~ 16141505 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:0004721 | phosphoprotein phosphatase activity | molecular_function |
| id | description |
|---|---|
| K04382 | PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU131891 | lncRNA | upstream | 465 | 16132758 ~ 16132987 (+) | True | G105448 |
| TU131886 | lncRNA | upstream | 23071 | 16105586 ~ 16110381 (+) | True | AMCG00011268 |
| TU131881 | lncRNA | upstream | 66010 | 16067233 ~ 16067442 (+) | True | G105438 |
| TU131879 | lncRNA | upstream | 69703 | 16062914 ~ 16063749 (+) | True | G105436 |
| TU131877 | lncRNA | upstream | 77003 | 16056165 ~ 16056449 (+) | True | G105434 |
| TU131909 | lncRNA | downstream | 58544 | 16200049 ~ 16200299 (+) | True | G105466 |
| TU131997 | lncRNA | downstream | 583183 | 16724688 ~ 16725153 (+) | True | G105538 |
| TU132204 | lncRNA | downstream | 1168254 | 17309759 ~ 17312068 (+) | True | G105684 |
| TU132235 | lncRNA | downstream | 1237115 | 17378620 ~ 17378860 (+) | True | G105715 |
| TU132287 | lncRNA | downstream | 1593485 | 17734990 ~ 17742387 (+) | True | G105756 |
| AMCG00011270 | mRNA | upstream | 8761 | 16119868 ~ 16124691 (+) | True | AMCG00011270 |
| AMCG00011268 | mRNA | upstream | 27066 | 16105650 ~ 16106386 (+) | False | AMCG00011268 |
| AMCG00011262 | mRNA | upstream | 100427 | 16031074 ~ 16033025 (+) | True | AMCG00011262 |
| AMCG00011258 | mRNA | upstream | 179675 | 15948639 ~ 15953777 (+) | True | AMCG00011258 |
| AMCG00011255 | mRNA | upstream | 259963 | 15863039 ~ 15873489 (+) | True | AMCG00011255 |
| AMCG00011267 | mRNA | downstream | 2334 | 16143839 ~ 16148914 (+) | True | AMCG00011267 |
| AMCG00011276 | mRNA | downstream | 92100 | 16233605 ~ 16240750 (+) | True | AMCG00011276 |
| AMCG00011275 | mRNA | downstream | 101822 | 16243327 ~ 16247084 (+) | True | AMCG00011275 |
| AMCG00011278 | mRNA | downstream | 284509 | 16426014 ~ 16427017 (+) | True | AMCG00011278 |
| AMCG00011277 | mRNA | downstream | 311565 | 16453070 ~ 16471261 (+) | True | AMCG00011277 |
| TU131803 | other | upstream | 149373 | 15963340 ~ 15984079 (+) | True | G105373 |
| TU131793 | other | upstream | 277668 | 15853764 ~ 15855784 (+) | True | AMCG00011252 |
| TU131792 | other | upstream | 281063 | 15850646 ~ 15852389 (+) | True | AMCG00011253 |
| TU131632 | other | upstream | 811027 | 15320780 ~ 15322425 (+) | False | AMCG00011241 |
| TU131514 | other | upstream | 1512918 | 14619690 ~ 14620534 (+) | True | G105139 |
| TU132132 | other | downstream | 836987 | 16978492 ~ 16982241 (+) | True | AMCG00011293 |
| TU132321 | other | downstream | 1642658 | 17784163 ~ 17788050 (+) | True | G105778 |
| TU132460 | other | downstream | 2971405 | 19112910 ~ 19117369 (+) | True | AMCG00011328 |
| TU132491 | other | downstream | 3080550 | 19222055 ~ 19222421 (+) | True | G105916 |
| TU132810 | other | downstream | 3953724 | 20095229 ~ 20162966 (+) | False | G106139 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00039118 | True | 1947 | mRNA | 0.54 | 7 | NC_007132.7 | 45351660 ~ 45363956 (-) |
| grasscarp (Ctenopharyngodon idella) | CI01000014_00672822_00683285.mRNA | True | 2094 | mRNA | 0.44 | 7 | CI01000014 | 672235 ~ 683862 (-) |
