RNA id: AMCG00014677



Basic Information


Item Value
RNA id AMCG00014677
length 260
RNA type mRNA
GC content 0.52
exon number 2
gene id AMCG00014677
representative True

Chromosome Information


Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 26624761 ~ 26628707 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


GCCATGGCTTCTGCTCCTGTGGTCGATGCATCTGCAGCGAAGGATGGTTTGGCAAGCTCTGCCAGTTTCCTCGGAAATGCGATATGACGGATAAAGAAAGCAAGAGCCTCTGCGAGACATCGGATGGCATCATCTGTACAGGAAAAGGTTCCTGTCACTGCGGGAAATGCATCTGCTCCCCCCAGGAATGGTACATTTCTGGGGAGTTCTGCGAATGCGATGACAGAGAATGTGACAAGCATGACGGTCTGATCTGCACA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU89834 lncRNA upstream 393196 26231219 ~ 26231565 (+) True G71859
TU89798 lncRNA upstream 613761 26010799 ~ 26011000 (+) True G71826
TU89783 lncRNA upstream 665059 25952233 ~ 25959702 (+) True G71817
TU89742 lncRNA upstream 854272 25770209 ~ 25770489 (+) True G71784
TU89729 lncRNA upstream 876353 25745803 ~ 25748408 (+) True G71772
TU89946 lncRNA downstream 276170 26904877 ~ 26911237 (+) True AMCG00014687
TU89956 lncRNA downstream 323589 26952296 ~ 26953253 (+) True G71963
TU89992 lncRNA downstream 398068 27026775 ~ 27027272 (+) True G71995
TU90084 lncRNA downstream 846357 27475064 ~ 27479444 (+) True G72072
TU90207 lncRNA downstream 1611859 28240566 ~ 28297484 (+) True G72169
AMCG00014676 mRNA upstream 36367 26585481 ~ 26588394 (+) True AMCG00014676
AMCG00014670 mRNA upstream 215670 26389232 ~ 26409091 (+) True AMCG00014670
AMCG00014669 mRNA upstream 235538 26373224 ~ 26389223 (+) True AMCG00014669
AMCG00014668 mRNA upstream 289400 26318031 ~ 26335361 (+) True AMCG00014668
AMCG00014667 mRNA upstream 380303 26203883 ~ 26244458 (+) True AMCG00014667
AMCG00014681 mRNA downstream 231026 26859733 ~ 26866240 (+) True AMCG00014681
AMCG00014682 mRNA downstream 240519 26869226 ~ 26881796 (+) True AMCG00014682
AMCG00014680 mRNA downstream 257780 26886487 ~ 26890130 (+) True AMCG00014680
AMCG00014684 mRNA downstream 262025 26890732 ~ 26900814 (+) True AMCG00014684
AMCG00014687 mRNA downstream 279651 26908358 ~ 26909374 (+) False AMCG00014687
TU89430 other upstream 3769115 22855342 ~ 22855646 (+) True G71525
TU88725 other upstream 8350401 18271854 ~ 18274360 (+) True G71004
TU88601 other upstream 9176308 17403511 ~ 17448453 (+) False AMCG00014553
TU88385 other upstream 10155648 16465681 ~ 16469113 (+) False AMCG00014525
TU88218 other upstream 10491959 16129525 ~ 16132802 (+) False AMCG00014508
TU90165 other downstream 1206796 27835503 ~ 27841871 (+) True AMCG00014704
TU90175 other downstream 1239996 27868703 ~ 27879800 (+) True AMCG00014703
TU90214 other downstream 1673666 28302373 ~ 28304073 (+) True G72175
TU90740 other downstream 3222743 29851450 ~ 29851821 (+) True G72605
TU90928 other downstream 4135644 30764351 ~ 30805741 (+) False AMCG00014777

Expression Profile