RNA id: TU124598



Basic Information


Item Value
RNA id TU124598
length 465
lncRNA type sense_over
GC content 0.54
exon number 2
gene id AMCG00015681
representative True

Chromosome Information


Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16467299 ~ 16473177 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


agactATCGGCAGCTCAGCCTGATAGGGAAGCTCATTTGGTCAATGTATGAAACTGTGCCTCCTGACACCAGTTAgggcacaggcggaggtgcCGCTGAGCCACAGTGGAAACCCCCTGGACTGGCACGACCACGCCGAGGTGTCCCCGAGGTCTGTGCAGTGAAGCGGCCTGTTCTTCTGTTCCGCTTCGCCGCTCCAGCGCAGGACATTCCCTGTCTGAGCAGACCTGTCCACATTCCTGACGTACATCCCACCTGCTTCTCAACTCCTCCCCGGtcaacacagacaaaaacaaggaaaacaaagagaggCACCGCGAGAGAGGTACCACTTTATAGTTGCCTGGCTATAAGGTGACAGAAGGCGACACTCCACTGAAAGATTTAGCTGTATCGccattaaaatatcaaacagcACCGCCAACATGAAGGAAACTTCAGAGGAGCGACAGAACATCCTGCCAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU124575 lncRNA downstream 42281 16424750 ~ 16428626 (-) True G99724
TU124513 lncRNA downstream 158937 16311708 ~ 16311970 (-) True G99679
TU124452 lncRNA downstream 340612 16130064 ~ 16130295 (-) True G99623
TU124443 lncRNA downstream 402778 16060196 ~ 16068129 (-) True G99614
TU124406 lncRNA downstream 466877 15999802 ~ 16004030 (-) False G99596
TU124602 lncRNA upstream 24308 16497485 ~ 16498531 (-) True G99735
TU124557 lncRNA upstream 30614 16503791 ~ 16527927 (-) True G99710
TU124629 lncRNA upstream 87408 16560585 ~ 16572276 (-) True G99758
TU124647 lncRNA upstream 119168 16592345 ~ 16593507 (-) False AMCG00015694
TU124648 lncRNA upstream 125916 16599093 ~ 16600378 (-) True G99777
AMCG00015683 mRNA downstream 6967 16460722 ~ 16463940 (-) True AMCG00015683
AMCG00015680 mRNA downstream 22720 16445972 ~ 16448187 (-) True AMCG00015680
AMCG00015677 mRNA downstream 146380 16315488 ~ 16324527 (-) True AMCG00015677
AMCG00015676 mRNA downstream 198260 16252419 ~ 16272647 (-) True AMCG00015676
AMCG00015672 mRNA downstream 410906 16057802 ~ 16060001 (-) True AMCG00015672
AMCG00015691 mRNA upstream 50937 16524114 ~ 16535290 (-) False AMCG00015691
AMCG00015690 mRNA upstream 63370 16536547 ~ 16546886 (-) True AMCG00015690
AMCG00015695 mRNA upstream 102081 16575258 ~ 16579210 (-) True AMCG00015695
AMCG00015696 mRNA upstream 108518 16581695 ~ 16590999 (-) True AMCG00015696
AMCG00015694 mRNA upstream 119051 16592228 ~ 16611444 (-) True AMCG00015694
TU124478 other downstream 248752 16221765 ~ 16222155 (-) True G99646
TU124430 other downstream 368451 16017583 ~ 16102456 (-) True G99605
TU124288 other downstream 767617 15701078 ~ 15703290 (-) True AMCG00015666
TU124200 other downstream 1210423 15259461 ~ 15260484 (-) True G99454
TU124175 other downstream 1299235 15170615 ~ 15171672 (-) False AMCG00015659
TU124562 other upstream 56200 16529377 ~ 16535468 (-) True AMCG00015691
TU124837 other upstream 1364403 17837580 ~ 17837942 (-) True G99939
TU124970 other upstream 2155166 18628343 ~ 18630665 (-) False AMCG00015723
TU125314 other upstream 3501779 19974956 ~ 19976069 (-) False AMCG00015752
TU125431 other upstream 3796652 20269829 ~ 20279644 (-) False AMCG00015761

Expression Profile