RNA id: AMCG00015697


Basic Information

Item Value
RNA id AMCG00015697
length 660
RNA type mRNA
GC content 0.53
exon number 6
gene id AMCG00015697
representative True

Chromosome Information

Item Value
chromosome id CM030132.1
NCBI id CM030132.1
chromosome length 32980562
location 16615613 ~ 16650920 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTCTTACCTGGGGAAGGAGTTCTGCTTCGTCAAGAGGTGGGGACTGCGTTATCACCTGAGCGCGGCCCTGCGGCCAGCTGCGCATGCGTGGAGCTGGCTGCTTGCCGTGTCCAGTTCCTGCAGTAGCCCAGGAGTTCTGACTCCccctacccccccaccaccaccaccacccccacccccaccacctggaatccccccaccaccaccacctcctcaACCAGGAGAGGATAGTCCATTTCATGGCTTACGCAACAAGAAACGGGTCCGGAGCTTTTTCTGGAAGACCATCCCTGAGGATAAAGTCCGTGGCAAACCCAACATCTGGACATTGACGGCAAGGCAACAGCAATACCAGATTGATGTCAGAACTATTGAGGAGTTATTTGGGCAGCAGGAGGAGGGCAGGTCTGGTGCAGCAGGGGCTCGGCACTCCACAGGTGGCTTCAGGACTTCCAATAAGGAGACCAGTGAGGAGatcTGTATTCTGGATTCCAAGAGAAATATGAATGTGGGGATTTTCCTGAAACAGTTCAAGAAGACAAATGAGTCTATCATCGAGGACATTCGCCTTGGCAACAGCAAGCTGTACGGCTCTGAAACATTGAAAGAGTTTCTAAAATTGTTGCCTGGaaaaaaaagttcAGAGATCAGTACTTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU124648 lncRNA downstream 15235 16599093 ~ 16600378 (-) True G99777
TU124647 lncRNA downstream 22106 16592345 ~ 16593507 (-) False AMCG00015694
TU124629 lncRNA downstream 43337 16560585 ~ 16572276 (-) True G99758
TU124557 lncRNA downstream 87686 16503791 ~ 16527927 (-) True G99710
TU124602 lncRNA downstream 117082 16497485 ~ 16498531 (-) True G99735
TU124679 lncRNA upstream 63527 16714447 ~ 16714835 (-) True G99804
TU124692 lncRNA upstream 219722 16870642 ~ 16871119 (-) True G99816
TU124706 lncRNA upstream 351074 17001994 ~ 17004413 (-) True G99830
TU124745 lncRNA upstream 484007 17134927 ~ 17135183 (-) True G99860
TU124821 lncRNA upstream 997131 17648051 ~ 17704580 (-) True G99923
AMCG00015694 mRNA downstream 4169 16592228 ~ 16611444 (-) True AMCG00015694
AMCG00015696 mRNA downstream 24614 16581695 ~ 16590999 (-) True AMCG00015696
AMCG00015695 mRNA downstream 36403 16575258 ~ 16579210 (-) True AMCG00015695
AMCG00015690 mRNA downstream 68727 16536547 ~ 16546886 (-) True AMCG00015690
AMCG00015691 mRNA downstream 80323 16524114 ~ 16535290 (-) False AMCG00015691
AMCG00015693 mRNA upstream 278 16651198 ~ 16677591 (-) True AMCG00015693
AMCG00015702 mRNA upstream 355202 17006122 ~ 17018382 (-) True AMCG00015702
AMCG00015704 mRNA upstream 476987 17127907 ~ 17131775 (-) True AMCG00015704
AMCG00015712 mRNA upstream 680732 17331652 ~ 17332731 (-) True AMCG00015712
AMCG00015711 mRNA upstream 686413 17337333 ~ 17488602 (-) True AMCG00015711
TU124562 other downstream 80145 16529377 ~ 16535468 (-) True AMCG00015691
TU124478 other downstream 393458 16221765 ~ 16222155 (-) True G99646
TU124430 other downstream 513157 16017583 ~ 16102456 (-) True G99605
TU124288 other downstream 912323 15701078 ~ 15703290 (-) True AMCG00015666
TU124200 other downstream 1355129 15259461 ~ 15260484 (-) True G99454
TU124837 other upstream 1186660 17837580 ~ 17837942 (-) True G99939
TU124970 other upstream 1977423 18628343 ~ 18630665 (-) False AMCG00015723
TU125314 other upstream 3324036 19974956 ~ 19976069 (-) False AMCG00015752
TU125431 other upstream 3618909 20269829 ~ 20279644 (-) False AMCG00015761
TU126211 other upstream 8342033 24992953 ~ 25000890 (-) True G101067

Expression Profile