RNA id: AMCG00020098


Basic Information

Item Value
RNA id AMCG00020098
length 723
RNA type mRNA
GC content 0.50
exon number 6
gene id AMCG00020098
representative True

Chromosome Information

Item Value
chromosome id CM030127.1
NCBI id CM030127.1
chromosome length 42978078
location 9780815 ~ 9783436 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGGAGGATGACCAAGAAGAGTTTGACTTGCTCGGGGAGCAGCTATATAATCTAATTTACCACAGACACTCTGAAATGGCTGCAAAACTTACAGGGATGCTGCTGGAACTTCCCATCCCAGTCATAGAGCAGATGTTACAGGATGAAGGGATGCTGTCTGAAGGAGTGGAAAAGGCTCTTCGCGCCTTAGAGGCACCAGCAGATGCTGGCAAGACTGAGCCTCAGGTTGAAGATGGAATCTCTGCCTCCACAGACTCCCTGGGTGACCAGCTCTATGATCTTGTTGATGTTTACAACACTTGTTACACCGAGAAGATAACGGGAATGTTACTAGAACAGAAGAAAGAAGATGTACGCAAACTACTTTCAAATCCCAGTGTTTTGGAGGAAAAGGTGAACATTGCACTACAAACACTGGCAGAACAAAACCAGATGGAGAGCCAAACAAGCAATTCTTCCGAGCTGGATGAGAAGGAGAGGCTGGGAGAGAAGCTCTTTGCTATTGTGGAGGAGATGGACAGAATGAACTGTGCGGACATCACAGGCATGCTGTTGGAAATGGACCTCTGCAATCTACAGGAGATTTTGCGTGATCGGGCCATGCTGGAGGTGGCAGTTCGGAGGGCACAGTCAGCGCTGAGGTCACACTGCAGTCAGCATCCACACCCAGAGACGGACACTGCGGCGCACACCGGGGGAGAGCAACCACACTATTATGGGTAG

Function

GO: NA

KEGG:

id description
ko04150 mTOR signaling pathway

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU76105 lncRNA downstream 477568 9269560 ~ 9303247 (-) True G60839
TU76097 lncRNA downstream 620082 9157927 ~ 9160733 (-) True G60833
TU76021 lncRNA downstream 763409 8980273 ~ 9017406 (-) True G60774
TU75971 lncRNA downstream 970922 8807020 ~ 8809893 (-) True G60730
TU75966 lncRNA downstream 981648 8798964 ~ 8799167 (-) True G60725
TU76310 lncRNA upstream 144541 9927977 ~ 9928866 (-) True G60993
TU76350 lncRNA upstream 302477 10085913 ~ 10091086 (-) True G61027
TU76378 lncRNA upstream 420403 10203839 ~ 10205678 (-) True G61052
TU76445 lncRNA upstream 722972 10506408 ~ 10507637 (-) True G61098
TU76499 lncRNA upstream 913182 10696618 ~ 10698099 (-) True G61136
AMCG00020097 mRNA downstream 39800 9738838 ~ 9741015 (-) True AMCG00020097
AMCG00020096 mRNA downstream 42596 9732983 ~ 9738219 (-) True AMCG00020096
AMCG00020094 mRNA downstream 233234 9542348 ~ 9547581 (-) True AMCG00020094
AMCG00020093 mRNA downstream 270070 9504386 ~ 9510745 (-) True AMCG00020093
AMCG00020088 mRNA downstream 336571 9400652 ~ 9444244 (-) True AMCG00020088
AMCG00020100 mRNA upstream 9370 9792806 ~ 9799158 (-) True AMCG00020100
AMCG00020106 mRNA upstream 43330 9826766 ~ 9852546 (-) True AMCG00020106
AMCG00020107 mRNA upstream 90013 9873449 ~ 9890563 (-) True AMCG00020107
AMCG00020112 mRNA upstream 148314 9931750 ~ 9943076 (-) True AMCG00020112
AMCG00020117 mRNA upstream 444058 10227494 ~ 10261824 (-) True AMCG00020117
TU75987 other downstream 940870 8839211 ~ 8839945 (-) True G60746
TU75977 other downstream 952706 8814259 ~ 8828109 (-) True AMCG00020066
TU75693 other downstream 2218223 7440803 ~ 7562592 (-) True G60516
TU75494 other downstream 3309381 6468288 ~ 6471434 (-) True AMCG00020019
TU75492 other downstream 3314229 6463548 ~ 6466586 (-) False G60348
TU76536 other upstream 972032 10755468 ~ 10756419 (-) True G61170
TU76663 other upstream 1912255 11695691 ~ 11701645 (-) True G61269
TU76919 other upstream 2700933 12484369 ~ 12486334 (-) False AMCG00020180
TU76921 other upstream 2700933 12484369 ~ 12496740 (-) False AMCG00020180
TU76915 other upstream 2707262 12490698 ~ 12504677 (-) False AMCG00020180

Expression Profile