RNA id: XM_043246663.1


Basic Information

Item Value
RNA id XM_043246663.1
length 2697
RNA type mRNA
GC content 0.50
exon number 6
gene id neurl1aa
representative False

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 23152502 ~ 23203136 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

CACCGAGACAGGAGGAGTGTCCGACTGTTTACATCTCGTTTCGGAGGCCGAGAGATATTTTCCTCCAGCAGTGATGTCGGTGTGGAATTATCGCACTCTCGACCTTTGAGAAATAAAGGCGGCCAGCGCAAAACAGTGACCCGGCGTTAAGCCATGGGAGGCCAGATAACCCGAAACGCCTTGTACGACTCTCTGGGTGGACCGTTCCCTTCAACAGCTCACCGATGCCACCACAAACCCAAACGCTGTTTACCCTTGCATCCGTGCGGAGGTGTCCCCGTGAGCCCCCTTCTCTTCCACCCCAACGCTAAAGGCTCTCAGATCGTCATGGATCTAGCACAAAGGAGCGTCAAAAGGCAGGCCAGCTTCTGCAACGCCATCACTTTCAGCAACCGGCCCATTGCTCTTTATGAGCAAGTACGCTTAAAGATAACTAAAAAGCAGTGCTGCTGGAGTGGTGCTCTCCGCCTGGGCTTTACTTCTAAGGACCCATCTAGAATCAATCCCGACAGCCTGCCCAAATACGCCTGCCCTGACCTGGTATCCCAGAACGGCTTCTGGGCCAAGGCCCTACCAGAAGAGTTTGCAAAcgaaggaaacctcatttcctTCTGGGTGGATAAGAAGGGGAGAGTATTTTACCGCATCAACGACTCCAGCCCCATGCTGTTCTTCAGTGGCGTTCGGACCACAGAGCCACTGTGGGCTCTCATCGATGTCTACGGTCTGACCAGAGGAGTGCAACTGCTGGACAGTGAAGTGGTCCCTCCAGACCTTCTCCGCCCACGATCCTTCACCACAGTGCGTGGATCCACCTCATTACGACGTGAAGCAGACACCTCCCGCCTGTCCGTCAGTCTTTGTGATCTTAACCTGCAACAAGATGATGCCAGACTTCGGCTCCCACCCGCCCCCGTCGCCTGTCCCATTCCTCAAAATTCCATGAACTCCCAGCAGTCATCACTGCTTCCTCACACCTTGGAATGTGACCTACGATTCCACCAGCTCCGAGGTGCCCACATCAAAACCCTTAATGAACAGACGGTGGCCCGATCTGAACACAACCGTGAAGAACGCACGCTGGTCTTCACAGATCGCCCACTACGAATTGGCGAAACTATCTTCATCAAAGTCATTAAGTCCAGCCCTGCTCGATCTGGGTCTCTCTCATATGGTGTGACGTCATGTGATCCAGCAGTGCTTCGCCCTAGCGACCTCCCTTACAATCCTGAGGCGCTGGTGGACCGTAAGGAATTCTGGGCAGTGTGCAGGGTGCCCACTGCTTTGCAGAGTGGCGATATCCTGGGTTTCCTGGTCACACAGGAAGGGGAAGTCATTCTCAGTCATAACGGCAACAATGTGGGGATGCAGGTGTGTGTGGACAACTCACGACCTCTCTGGATGTTCTTTGGACTGCATGGTGCTGTGACGCAGCTAAGGATTCTAGGCTCCACTTTCTTGGGTGATGCTCGTGACCCATCCAGCCCCGGCTCGCCCTCTGCCTCCCCCCTCTCGCCCTCAGGCCTGTGCGGTGGAAGTCCAGAGCCCAGTCTCAACGAACGTGGCTGTTCTGCTGCCTTCTGCAGCTCCACTGAAGGAACAACACCCAACTCGCCCATCAGTCTCCCCAAATCTCCCACTTTCCCATCTGCGTCAGGCTCGTGGCAGGACGAGTGTTCTATCTGCTATGAAAACACAGTGGATACGGTCATCTACGCCTGCGGACACATGTGTCTTTGCTACACCTGCGGCCTCCGCCTCAAAAAAATGGCCAACGCTAGCTGTCCTATCTGTAGGAGGGCTATCAAAGACATTATAAAGACCTACCGGAGCACTTAGGGGGGCCCTTTCACCCCCCGCACCCAAGTCTCATAAGGGCCATTAAGGATCTCTAATAGATCTCTGTTTCAAGAGAGGGTTGGTGTCACAGTTCAGGGACTCGCTCTGGCACTGCATGGGTCTGCTTTCCCATGGCGATGACTTTTGAACCCTTGAACCTTCAAGGCTCAGGCATCCATTCACAAAGGTCTTTTGTATTTCATGCTCAAGTCTCTGTTGCTATAGTAACCAGTGatgttgctgctttttttaGAAGCATCTGGCTTTTCAACTGATATAAGACAGTATCTCATCGAATTCAGGACATTTCAGGTGACGCAGGAGATATTTAAGGTTGCACATCTCCCATTTCATCTACCTTCTCCGTGAGCCATAATAGACTCTCATTCATAGCTTAGCTGTGTATCCTTTAAAGCTGGAATCATATTCAATAGGGGGTGTTACGGtctattattttttccttctgcTGTCCTATCTAGACAGACCAGCTAAGGCACTTTCACCATTGAAATTCATACAAAAACGTCTCAGTGTTTCACAATTTTTGTCTGTGCTGGGCTGAGACAGAGGCGGAAAGACTTATATAAAAGGTACAGCGCTTTTCATACCTCACCATTTCATGCTAGTTGTGTAACCGACAGCTTGCCCGCATTACATGCTATAAAGTGAGTCGATCTGGAGATCTTTGTGCATTGATGACTATTTGATcttgttttgtaatgtaatatgaAGCTTTGGTAGGTAGCAGGTGAAGTCAGCTAATGAACGCTATAATTTAGCTTTTGCGTGCAACAAGTAGGACATTGTGGTGGAATTAAAGAGAtataatttgttaaaacaataaacaggAATGATTAA

Function

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU7913 lncRNA downstream 131671 23018238 ~ 23020831 (-) False gja5b
XR_006250508.1 lncRNA downstream 173868 22973679 ~ 22978634 (-) True LOC122342025
TU7851 lncRNA downstream 286708 22864839 ~ 22865794 (-) False itsn1
TU7854 lncRNA downstream 301154 22851012 ~ 22851348 (-) True G5466
TU7853 lncRNA downstream 310478 22841802 ~ 22842024 (-) True G5465
TU8030 lncRNA upstream 438824 23619700 ~ 23622881 (-) True G5577
XR_006251150.1 lncRNA upstream 527537 23708413 ~ 23713457 (-) True LOC122346633
TU8036 lncRNA upstream 552298 23733174 ~ 23735603 (-) True G5583
TU8017 lncRNA upstream 555100 23735976 ~ 23736893 (-) True G5568
TU8057 lncRNA upstream 590148 23771024 ~ 23865352 (-) False LOC122351696
XM_043235811.1 mRNA downstream 122192 23020786 ~ 23030310 (-) True gja5b
XM_043236520.1 mRNA downstream 238894 22909995 ~ 22913608 (-) True setd4
XM_043236429.1 mRNA downstream 249089 22864831 ~ 22903413 (-) False itsn1
XM_043248966.1 mRNA upstream 591747 23772623 ~ 23916447 (-) False LOC122351696
XM_043248986.1 mRNA upstream 591747 23772623 ~ 23916445 (-) False LOC122351696
XM_043248956.1 mRNA upstream 591747 23772623 ~ 23916445 (-) True LOC122351696
XM_043244889.1 mRNA upstream 852016 24032892 ~ 24038656 (-) True LOC122348966
XM_043246219.1 mRNA upstream 859667 24040543 ~ 24041958 (-) False LOC122350023
TU7878 other downstream 236097 22913900 ~ 22916405 (-) True G5468
TU7773 other downstream 601552 22539684 ~ 22550950 (-) False atp11a
TU7673 other downstream 823573 22259439 ~ 22328929 (-) True G5356
unassigned_transcript_106 other downstream 1268312 21884118 ~ 21884190 (-) True trnat-ugu
TU7268 other downstream 1356064 21774634 ~ 21796438 (-) False LOC122348907
XR_006251794.1 other upstream 591747 23772623 ~ 23916448 (-) False LOC122351696
XR_006251793.1 other upstream 591747 23772623 ~ 23916446 (-) False LOC122351696
TU8134 other upstream 851987 24032863 ~ 24034499 (-) False G5624
TU8141 other upstream 851987 24032863 ~ 24041997 (-) False G5624
TU8143 other upstream 851987 24032863 ~ 24172062 (-) False G5624

Expression Profile