RNA id: XM_043247715.1


Basic Information

Item Value
RNA id XM_043247715.1
length 2666
RNA type mRNA
GC content 0.45
exon number 8
gene id adipor1b
representative False

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13608854 ~ 13615338 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

GTACCACGTGCTCTTCCTCCCTCTGTGACCGAGGGACAGGACGTACCCGCACCGCCTCCGCGAGCTGATGTAGCGTACCGTGTGTCAGACCGCCTCAATCTGTGTCAATTAAGTGATCGGTCTTATAGCTTGCTGTGGAGCCGAATCGCCTGGTTCTACAGGTTTCAGAGACTCGTAGCGAGCAGACGGCGAGCAGCTGCTGGTGAACTCCGATGAACTGATTTCACTGCCTGTCCAGCCAGGCCCAGATCGTGAACTGTGGAACAAGGTGGAAACTCCGGGGAGTTTTAGGTTTGTCTCCCCATGACAACCTGTCACCATGGTGACTGCGGCTCCAACAGTGATGCCGGGCGGCGCACCTCTGATGATGAGGACGCGGAGCTCGCGGAGCTTGGGCCGCTGCTGACATATACGGCTAAAGCTGAGAAATCAAGAGGTGCATCAGCATTTcctgatgaggatgaggatgaggatgaagaagGACGAGGTTTGCGGGTGGTTACACTGCCCATGCAGGCACACCATGCCATGGAGAAGATGGAGGAGTTTGTACACAAGGTATGGGAAGGACGTTGGCGAGTTATTCCATACCATCTCCTCCCCGACTGGCTGAAGGACAATGACTACCTGCTGCACGGACACCGCCCCCCCATGCCGTCCTTCCGTGCCTGCTTTGGGAGCATCTTCAGGATTCACACAGAAACTGGAAACATCTGGACTCACCTGCTCGGCTTAATTCTGTTCCTGTGCTTGGGCACACTGACAATGCTGCGGCCAAACGTGTCGTTCATGGCGCCCATTCAGGAGAAGGTGGTGTTTGGCGTGTTCTTCCTGGGCGCAGTTCTTTGTTTGTGCTTCTCCTGGCTTTTTCACACCGTCTACTGCCACTCAGAAAAGGTCTCCAGGACTTTCTCAAAGTTGGATTACTCTGGTATCGCGTTGTTGATCATGGGCTCATTCGTTCCGTGGCTGTACTACTCGTTTTACTGCTCTCCTCAGCCGCGGCTCATCTATCTCTCTGTTGTATGTGTGCTGGGTGTCGCTGCTATCATTGTGGCCCAGTGGGACCGATTCGCCACTCCTCGCCACCGGTCCACCCGTGCAGGTGTTTTCCTGGGCCTTGGTCTCAGTGGGCTCATTCCCACAATGCATTTTACCATCGCAGAGGGTTTTGTGAAGGCAACGACGGTGGGTCAGATGGGCTGGTTCTATCTGATGGGTGCCATGTACATTAGTGGAGCAGCACTTTATGCAGCACGTATACCTGAACGCTACTTCCCTGGGAAATGTGACATCTGGTTTCAGTCTCATCAGATATTCCACGTGCTGGTTGTTGCAGCGGCGTTTGTCCATTTTTATGGGATCTCAAACCTGCAGGAGTTCCGCTACGGCCTGGAAGGAGGCTGCACAGATGATACTTTGCTGTAAAGAGAAACAAATCACTTGAACTTTGTCCAGTGCCTGCTCACTTCACAACGAACCTGGACCCGACACAATGctgatttaataatttttattatctcTTGAAggattttaacatatatttgaaTAAGATACTTAAAACTCTTGATAAATGAGGTAGTCTTGTGTTTATATCGTTCTTTGTTATTTCAGTGCAGCACAGAATTTATTGTAAATCACCggaataaatcataaatcattacAGTGGTCTCGAGAGGCACTACCTCCTCCAACACTCTTTCTTCTGACTGATCTGTTGGTTTGTGGTTCTGTACTTTTTAAGGATTTTAGGGAAAACGCATAGAAACATGCTTAGGTCTGAgttttgtcaaaaatgtttGCATGATCATTCATTAACTTTTGACCTGAAATGCTTAACCTAGAGCTTTAGCAATGGAATTCATGTTGGGACACAATTTTATCTTCTGTTTGAGCGAATCAGGGTTTCAGTAAGAAATATTTGCACTGGTTTTAGAAGTCAAGATATTAAAACGAGAGAATAAAGATGAAACGCCTAGAATTGTTTGCTTTGATCATTAACAGtattttggtgtgtgtgtgtgtgtatgtgtatacaaCACTACTCAAAATTGGAGAACACTTACAAATACCCTATTTAACTGGCAGTATAACTGCCATGTAAAAGAAATGCACGAGAGGCTCGGATAATGTGTAGAATCTCATTGGTCAACCGGTTCAGCACTCCAGCTAGAATGCTTGATAGTTCAGCGCTGAACAGGGTCAGGAGCTGTCTTGACATTTAAAGGAATTTTGACTAAAAGCCCACTCTGCAGTTAACAAACCTCTTGTCAGTAAAAAGAATCCAAAAGCTAGACTAACCTTTGCTGAGGAGGATGTTGTATGGACCGAAGAGAACCGGTCCATAGTTCACCTAAGTGATAAAgcaagtttaattttatttaggtACGATGGGAATCATGCTTGCCATCAAACTGGGAAATGACTACCACTGAACAAACTATACTTTAGTGGTAAGACGTTAATGTACTGATTTATCTGTgaataaatgtcacattttagaAAACAGTATATTATGTTAAAGCCATTTTTACCTGGTGCTAAAGAAATGTCATCTGTACTCTGTAATGTACAAATAATCGTGTTTAATCGTAACTTGCAAGTTGCATATGATGTGTTTATGTGCTtacattattttctattattaaaacaatagatAAAACAAA

Function

GO:

id name namespace
GO:0033211 adiponectin-activated signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0042562 hormone binding molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU94394 lncRNA downstream 258583 13347624 ~ 13350271 (-) True G63751
TU94388 lncRNA downstream 276467 13332164 ~ 13332387 (-) True G63745
TU94378 lncRNA downstream 333986 13261692 ~ 13274868 (-) True G63735
TU94346 lncRNA downstream 362724 13185867 ~ 13246130 (-) False tafa3b
TU94341 lncRNA downstream 477637 13128190 ~ 13131217 (-) True G63711
XR_006251607.1 lncRNA upstream 4660 13619992 ~ 13682456 (-) True LOC122350567
TU94556 lncRNA upstream 72846 13688178 ~ 13693222 (-) True G63866
TU94557 lncRNA upstream 84325 13699657 ~ 13700068 (-) True G63867
TU94558 lncRNA upstream 95823 13711155 ~ 13712401 (-) True G63868
TU94559 lncRNA upstream 95823 13711155 ~ 13711368 (-) False G63868
XM_043247847.1 mRNA downstream 577 13599250 ~ 13608277 (-) False LOC122351021
XM_043247848.1 mRNA downstream 577 13599250 ~ 13608277 (-) True LOC122351021
XM_043247324.1 mRNA downstream 11007 13593701 ~ 13597847 (-) True tuba5
XM_043247318.1 mRNA downstream 17678 13571079 ~ 13591176 (-) True kdm5bb
XM_043247173.1 mRNA upstream 24613 13639945 ~ 13641482 (-) True cebpb
XM_043246301.1 mRNA upstream 101296 13716628 ~ 13720514 (-) True mc3r
XM_043246691.1 mRNA upstream 557722 14173054 ~ 14175823 (-) True LOC122350319
XM_043246693.1 mRNA upstream 566200 14181532 ~ 14186141 (-) True LOC122350320
XM_043246692.1 mRNA upstream 566200 14181532 ~ 14186139 (-) False LOC122350320
XR_006251575.1 other downstream 1245759 12351246 ~ 12363095 (-) False kcnq2a
TU93842 other downstream 1344321 12263694 ~ 12264533 (-) True G63385
unassigned_transcript_1295 other downstream 1811652 11797130 ~ 11797202 (-) True trnaf-gaa_1
TU93692 other downstream 1829603 11778271 ~ 11779251 (-) True G63274
TU93426 other downstream 2044449 11562278 ~ 11564405 (-) False G63095
TU94636 other upstream 194096 13809428 ~ 13863250 (-) True G63933
XR_006251614.1 other upstream 1108876 14724208 ~ 14731391 (-) False slc20a1a
TU95023 other upstream 1164199 14779531 ~ 14781710 (-) True G64228
TU95181 other upstream 1668529 15283861 ~ 15284130 (-) True G64353
XR_006251609.1 other upstream 2033894 15649226 ~ 15700896 (-) False mvb12bb

Expression Profile