RNA id: AMCG00001329



Basic Information


Item Value
RNA id AMCG00001329
length 390
RNA type mRNA
GC content 0.49
exon number 2
gene id AMCG00001329
representative True

Chromosome Information


Item Value
chromosome id CM030137.1
NCBI id CM030137.1
chromosome length 27060302
location 25150297 ~ 25150756 (+)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence


TCGCCTGGAGGATTTGTCCAGAGGTTCGGATGCCAAGATACATGCAGAACTTGGCAATATCTCCTGAGACCTGAAAGACCTGAAGACAGATATCTCTGGTATCCGTGCCTGGGTCGACAAGAACACAACACAAAGGCAATCTCTACGTGCAATGGCAGAGTCGAGCAGCTGGAGGCCAGGCTAGCGGATCAAGAAGACAGAAACCGcaaatccATTAATTTGTGGTTTCTGTTCCTGGCTGGTAGTAAACTTGAAATTATGCGAGCCCACCATATTTACAGCGGACGGTCAAAATCGAGCGACAGGCCAAGGACCCTACATTTCAACCTCATGCACTACTCAGATCGGCAATTTATCCTGCAAGCGGCAAGGAAGAACCCACCTATCTTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU163798 lncRNA upstream 24218 25123594 ~ 25126079 (+) True G130695
TU163795 lncRNA upstream 63399 25086661 ~ 25086898 (+) True G130692
TU163792 lncRNA upstream 93319 25056621 ~ 25056978 (+) True G130689
TU163787 lncRNA upstream 127248 25022679 ~ 25023049 (+) True G130684
TU163746 lncRNA upstream 398883 24751119 ~ 24751414 (+) True G130648
TU163808 lncRNA downstream 45626 25196382 ~ 25196991 (+) True G130705
TU163814 lncRNA downstream 64469 25215225 ~ 25215735 (+) True G130711
TU163815 lncRNA downstream 65182 25215938 ~ 25217050 (+) True G130712
TU163820 lncRNA downstream 70860 25221616 ~ 25246154 (+) True G130715
TU163875 lncRNA downstream 231423 25382179 ~ 25397634 (+) True G130757
AMCG00001324 mRNA upstream 4241 25119636 ~ 25146056 (+) True AMCG00001324
AMCG00001322 mRNA upstream 105485 25029903 ~ 25044812 (+) True AMCG00001322
AMCG00001319 mRNA upstream 288592 24702643 ~ 24861705 (+) True AMCG00001319
AMCG00001317 mRNA upstream 490368 24645852 ~ 24659929 (+) True AMCG00001317
AMCG00001315 mRNA upstream 543825 24587338 ~ 24606472 (+) True AMCG00001315
AMCG00001330 mRNA downstream 8 25150764 ~ 25164833 (+) True AMCG00001330
AMCG00001325 mRNA downstream 95620 25246376 ~ 25296858 (+) True AMCG00001325
AMCG00001328 mRNA downstream 148340 25299096 ~ 25302688 (+) True AMCG00001328
AMCG00001332 mRNA downstream 213137 25363893 ~ 25365296 (+) True AMCG00001332
AMCG00001331 mRNA downstream 272931 25423687 ~ 25450310 (+) True AMCG00001331
TU163730 other upstream 558822 24584179 ~ 24591475 (+) False AMCG00001315
TU163702 other upstream 695912 24433793 ~ 24454385 (+) True G130616
TU163362 other upstream 1983641 23166263 ~ 23166656 (+) True G130335
TU162879 other upstream 3873418 21271384 ~ 21276879 (+) True G129913
TU162840 other upstream 4071427 21077135 ~ 21078870 (+) True G129877
TU164194 other downstream 1705843 26856599 ~ 26863132 (+) False AMCG00001361
TU164234 other downstream 1801152 26951908 ~ 26954597 (+) True AMCG00001365

Expression Profile