RNA id: AMCG00014118


Basic Information

Item Value
RNA id AMCG00014118
length 294
RNA type mRNA
GC content 0.50
exon number 2
gene id AMCG00014118
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 2151885 ~ 2154746 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGATCCTTCTGTCAGTATTGCGTATCTCCAGTTCAGCAGGAAGAGCCAAGGCCGTGTCCACCTGCAGCTCACACCTGCTGGTCATCTCTGTGTTCTTCCTCACAATAGCAGGGGTCTTCATCTCCTACAGGATTCCTGGGACCTCCGTGGACATGCGTGTCATGGGGTCTGTGATTCAGAATGTCTTCCCTGCCCTCATGAATCCGATCATCTACTGCCTGAGGACTAAAGAGATCAGGGACAGCTTGATTAATACCCTAAAAAAGACCAAAATCTTCCCAGGTAGCAAGTGA

Function

GO:

id name namespace
GO:0050896 response to stimulus biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU84811 lncRNA downstream 26978 2095067 ~ 2124907 (-) False AMCG00014119
TU84810 lncRNA downstream 56254 2095306 ~ 2095631 (-) False AMCG00014119
TU84803 lncRNA downstream 64764 2086111 ~ 2087121 (-) False AMCG00014119
TU84795 lncRNA downstream 92394 2056849 ~ 2059491 (-) True G67881
TU84744 lncRNA downstream 209465 1942027 ~ 1942420 (-) True G67849
TU84833 lncRNA upstream 195379 2350125 ~ 2373329 (-) True G67911
TU84881 lncRNA upstream 453523 2608269 ~ 2608479 (-) True G67953
TU85010 lncRNA upstream 542062 2696808 ~ 2701159 (-) True G68057
TU85014 lncRNA upstream 553071 2707817 ~ 2710329 (-) True G68061
TU85029 lncRNA upstream 603739 2758485 ~ 2758840 (-) True G68070
AMCG00014119 mRNA downstream 26932 2085941 ~ 2124953 (-) True AMCG00014119
AMCG00014116 mRNA downstream 105638 2038470 ~ 2046247 (-) True AMCG00014116
AMCG00014114 mRNA downstream 114064 2032712 ~ 2037821 (-) True AMCG00014114
AMCG00014117 mRNA downstream 119456 2032241 ~ 2032429 (-) True AMCG00014117
AMCG00014115 mRNA downstream 120358 2029590 ~ 2031527 (-) True AMCG00014115
AMCG00014133 mRNA upstream 22073 2176819 ~ 2177304 (-) True AMCG00014133
AMCG00014136 mRNA upstream 113771 2268517 ~ 2278983 (-) True AMCG00014136
AMCG00014138 mRNA upstream 170356 2325102 ~ 2339187 (-) True AMCG00014138
AMCG00014134 mRNA upstream 377208 2531954 ~ 2540358 (-) True AMCG00014134
AMCG00014132 mRNA upstream 388172 2542918 ~ 2548184 (-) True AMCG00014132
TU84738 other downstream 233703 1916727 ~ 1918182 (-) True G67843
TU84714 other downstream 249270 1900640 ~ 1902615 (-) True G67832
TU84719 other downstream 259332 1892063 ~ 1892553 (-) True G67835
TU84716 other downstream 268935 1879203 ~ 1882950 (-) False AMCG00014108
TU84711 other downstream 280731 1869850 ~ 1871154 (-) False AMCG00014105
TU84851 other upstream 385571 2540317 ~ 2542697 (-) False AMCG00014134
TU84998 other upstream 486313 2641059 ~ 2643907 (-) False AMCG00014144
TU85055 other upstream 670816 2825562 ~ 2829144 (-) True G68088
TU86038 other upstream 5223342 7378088 ~ 7380780 (-) True AMCG00014271
TU86071 other upstream 5262852 7417598 ~ 7423291 (-) False AMCG00014278