RNA id: AMCG00014763


Basic Information

Item Value
RNA id AMCG00014763
length 675
RNA type mRNA
GC content 0.54
exon number 7
gene id AMCG00014763
representative True

Chromosome Information

Item Value
chromosome id CM030128.1
NCBI id CM030128.1
chromosome length 42883965
location 30620505 ~ 30627347 (-)
genome version AmiCal1_2021_bowfin_Genome
species bowfin
(Amia calva)

Sequence

ATGTTTGCTGCAAGATCTGCGGTGTGTAAATCTCTGCTCTCCTTTCTAAGACCCCGGCCAGTTTGCGTGGGGTTAATCCACTCCTCTTCCCATTGCAGAGGAGCCAATGTCGCTGTTGTCCTGTCAGGCTGTGGGGTGTATGATGGGACAGAGATCCACGAAGCATCTGCGATTCTGGTGCACCTGAGCAGGGGTGGCGCAGATGTGCAGATGTATGCACCAGATGTGGCCCAGATGCATGTCATTGACCACTGCAAGGGCGAGCCTGCAGAGGAGACCAGAAACGTGCTGTCGGAGTCGGCCCGCATTGCCCGAGGGAATGTGAAGGACCTAGCCCAGCTGAGTGTTCAGCATCACGATGCTGTCATCTTCCCAGGAGGGTTCGGCGCTGCTAAAAACCTATCTACTTTTGCAGTGGATGGGACGGACTGCATAGTCAACAAGGATGTGGAGAGAGTGCTTAAAGACTTTCACAAAGCTGGGAAGCCCATCGGGCTGTGCTGCATCTCCCCTGTCCTGGCTGCCAAGGTGCTCCCCAATGTGGAAGTAACCGTGGGacatgaagaggaggagggtgggAAATGGCCATATGCTGCTTTCATGTGTGACACCAAACTGCACCACATATTTGATGGCATTGGAGCCATGGTACAGAATGTGCTGAAGCTGAGTGGG

Function

GO:

id name namespace
GO:0005739 mitochondrion cellular_component

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU90845 lncRNA downstream 225167 30395139 ~ 30395338 (-) True G72693
TU90837 lncRNA downstream 358901 30261337 ~ 30261604 (-) True G72685
TU90829 lncRNA downstream 409109 30211142 ~ 30211396 (-) True G72680
TU90803 lncRNA downstream 453579 30166717 ~ 30166926 (-) True G72659
TU90789 lncRNA downstream 565332 30054340 ~ 30055173 (-) True G72646
TU90943 lncRNA upstream 214176 30841523 ~ 30844128 (-) False AMCG00014775
TU90944 lncRNA upstream 214176 30841523 ~ 30844948 (-) True AMCG00014775
TU90970 lncRNA upstream 318743 30946090 ~ 30947343 (-) True G72790
TU90971 lncRNA upstream 322763 30950110 ~ 30951375 (-) True G72791
TU91053 lncRNA upstream 834832 31462179 ~ 31463783 (-) True G72862
AMCG00014762 mRNA downstream 403444 30212138 ~ 30217061 (-) True AMCG00014762
AMCG00014758 mRNA downstream 669200 29950031 ~ 29951305 (-) True AMCG00014758
AMCG00014759 mRNA downstream 679622 29915255 ~ 29940883 (-) True AMCG00014759
AMCG00014755 mRNA downstream 767547 29843424 ~ 29852958 (-) True AMCG00014755
AMCG00014756 mRNA downstream 779348 29835251 ~ 29841157 (-) True AMCG00014756
AMCG00014764 mRNA upstream 3089 30630436 ~ 30646339 (-) True AMCG00014764
AMCG00014765 mRNA upstream 41179 30668526 ~ 30689037 (-) True AMCG00014765
AMCG00014766 mRNA upstream 61695 30689042 ~ 30695325 (-) True AMCG00014766
AMCG00014780 mRNA upstream 131810 30759157 ~ 30763061 (-) True AMCG00014780
AMCG00014775 mRNA upstream 214695 30842042 ~ 30846800 (-) False AMCG00014775
TU90581 other downstream 1222200 29389290 ~ 29398305 (-) True G72477
TU90285 other downstream 2288023 28329739 ~ 28332482 (-) True G72236
TU87063 other downstream 18958012 11660021 ~ 11662493 (-) False AMCG00014374
TU86854 other downstream 19822358 10796716 ~ 10798147 (-) True G69537
TU86630 other downstream 21303338 9310451 ~ 9317167 (-) True AMCG00014328
TU91283 other upstream 1635820 32263167 ~ 32263427 (-) True G73047
TU91373 other upstream 1970115 32597462 ~ 32614806 (-) True G73127
TU91374 other upstream 1970115 32597462 ~ 32619149 (-) False G73127
TU91480 other upstream 2174511 32801858 ~ 32806295 (-) True AMCG00014824
TU91607 other upstream 4142236 34769583 ~ 34769979 (-) True G73328

Expression Profile