Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU91073 |
| length | 1710 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 3 |
| gene id | G72874 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CM030128.1 |
| NCBI id | CM030128.1 |
| chromosome length | 42883965 |
| location | 31515430 ~ 31519932 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| species | bowfin (Amia calva) |
| id | name | namespace |
|---|---|---|
| GO:1905039 | carboxylic acid transmembrane transport | biological_process |
| GO:0098656 | anion transmembrane transport | biological_process |
| GO:1903825 | organic acid transmembrane transport | biological_process |
| GO:1990542 | mitochondrial transmembrane transport | biological_process |
| GO:0015718 | monocarboxylic acid transport | biological_process |
| GO:0006839 | mitochondrial transport | biological_process |
| GO:0006848 | pyruvate transport | biological_process |
| GO:0006850 | mitochondrial pyruvate transmembrane transport | biological_process |
| GO:1901475 | pyruvate transmembrane transport | biological_process |
| GO:0008137 | NADH dehydrogenase (ubiquinone) activity | molecular_function |
| GO:0009055 | electron transfer activity | molecular_function |
| GO:0003954 | NADH dehydrogenase activity | molecular_function |
| GO:0022857 | transmembrane transporter activity | molecular_function |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0050136 | NADH dehydrogenase (quinone) activity | molecular_function |
| GO:0022890 | inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015002 | heme-copper terminal oxidase activity | molecular_function |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | molecular_function |
| GO:0015075 | ion transmembrane transporter activity | molecular_function |
| GO:0015077 | monovalent inorganic cation transmembrane transporter activity | molecular_function |
| GO:0015078 | proton transmembrane transporter activity | molecular_function |
| GO:0008324 | cation transmembrane transporter activity | molecular_function |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | molecular_function |
| GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | molecular_function |
| GO:0004129 | cytochrome-c oxidase activity | molecular_function |
| GO:0016675 | oxidoreductase activity, acting on a heme group of donors | molecular_function |
| GO:0016676 | oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU91062 | lncRNA | downstream | 29964 | 31480848 ~ 31485466 (-) | True | G72867 |
| TU91063 | lncRNA | downstream | 48374 | 31466492 ~ 31467056 (-) | True | G72868 |
| TU91053 | lncRNA | downstream | 51647 | 31462179 ~ 31463783 (-) | True | G72862 |
| TU90971 | lncRNA | downstream | 564055 | 30950110 ~ 30951375 (-) | True | G72791 |
| TU90970 | lncRNA | downstream | 568087 | 30946090 ~ 30947343 (-) | True | G72790 |
| TU91136 | lncRNA | upstream | 177806 | 31697655 ~ 31698012 (-) | True | G72919 |
| TU91232 | lncRNA | upstream | 377091 | 31896940 ~ 31898945 (-) | True | G73005 |
| TU91282 | lncRNA | upstream | 736306 | 32256155 ~ 32256775 (-) | True | G73046 |
| TU91285 | lncRNA | upstream | 745283 | 32265132 ~ 32265424 (-) | True | G73049 |
| TU91304 | lncRNA | upstream | 837853 | 32357702 ~ 32362393 (-) | True | G73066 |
| AMCG00014796 | mRNA | downstream | 43808 | 31469559 ~ 31471622 (-) | True | AMCG00014796 |
| AMCG00014789 | mRNA | downstream | 170000 | 31337113 ~ 31345430 (-) | True | AMCG00014789 |
| AMCG00014790 | mRNA | downstream | 222695 | 31279314 ~ 31292735 (-) | True | AMCG00014790 |
| AMCG00014791 | mRNA | downstream | 236300 | 31261716 ~ 31279130 (-) | True | AMCG00014791 |
| AMCG00014785 | mRNA | downstream | 535553 | 30952471 ~ 30979877 (-) | True | AMCG00014785 |
| AMCG00014794 | mRNA | upstream | 9148 | 31528997 ~ 31578588 (-) | True | AMCG00014794 |
| AMCG00014795 | mRNA | upstream | 74542 | 31594391 ~ 31620377 (-) | True | AMCG00014795 |
| AMCG00014797 | mRNA | upstream | 180778 | 31700627 ~ 31707522 (-) | True | AMCG00014797 |
| AMCG00014806 | mRNA | upstream | 249724 | 31769573 ~ 31789737 (-) | True | AMCG00014806 |
| AMCG00014809 | mRNA | upstream | 447595 | 31967444 ~ 31969223 (-) | True | AMCG00014809 |
| TU90581 | other | downstream | 2117125 | 29389290 ~ 29398305 (-) | True | G72477 |
| TU90285 | other | downstream | 3182948 | 28329739 ~ 28332482 (-) | True | G72236 |
| TU87063 | other | downstream | 19852937 | 11660021 ~ 11662493 (-) | False | AMCG00014374 |
| TU86854 | other | downstream | 20717283 | 10796716 ~ 10798147 (-) | True | G69537 |
| TU86630 | other | downstream | 22198263 | 9310451 ~ 9317167 (-) | True | AMCG00014328 |
| TU91283 | other | upstream | 743318 | 32263167 ~ 32263427 (-) | True | G73047 |
| TU91373 | other | upstream | 1077613 | 32597462 ~ 32614806 (-) | True | G73127 |
| TU91374 | other | upstream | 1077613 | 32597462 ~ 32619149 (-) | False | G73127 |
| TU91480 | other | upstream | 1282009 | 32801858 ~ 32806295 (-) | True | AMCG00014824 |
| TU91607 | other | upstream | 3249734 | 34769583 ~ 34769979 (-) | True | G73328 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000032_03326549_03327076.mRNA | False | 2316 | mRNA | 0.44 | 1 | CI01000032 | 3326549 ~ 3328864 (+) |
