Fish Single-cell RNA Database

CELL TYPE: Pectoral fin

Distribution of Pectoral fin in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000043796	ms4a17a.7	4: 76705830 ~ 76718322 (+)
ENSDARG00000012066	dcn	4: 16368762 ~ 16412084 (-)
ENSDARG00000025073	rpl18a	4: 391297 ~ 398451 (+)
ENSDARG00000037960	lrrc17	4: 20141191 ~ 20156085 (-)
ENSDARG00000031228	podxl	4: 11732156 ~ 11751037 (-)
ENSDARG00000045749	ppfibp1a	4: 10811490 ~ 10835620 (-)
ENSDARG00000094854	ms4a17a.9	4: 76608282 ~ 76633286 (+)
ENSDARG00000018820	flncb	4: 10066840 ~ 10130349 (+)
ENSDARG00000069388	tmem88b	7: 21787507 ~ 21806454 (+)
ENSDARG00000087196	fibinb	7: 34290051 ~ 34293073 (+)
ENSDARG00000036080	cd81a	7: 32983440 ~ 33023404 (-)
ENSDARG00000102178	emilin2b	7: 71664624 ~ 71687849 (+)
ENSDARG00000017676	mmp2	7: 35410050 ~ 35432901 (-)
ENSDARG00000079578	rbpms2b	7: 48252638 ~ 48263633 (-)
ENSDARG00000021442	cdh11	7: 43760149 ~ 43857938 (-)
ENSDARG00000036298	rps13	7: 27041315 ~ 27044013 (+)
ENSDARG00000053493	aldh1a2	7: 30326184 ~ 30367650 (-)
ENSDARG00000033466	tagln2	5: 37087583 ~ 37095460 (+)
ENSDARG00000103515	vcana	5: 46424437 ~ 46486028 (+)
ENSDARG00000089769	hapln1a	5: 46490622 ~ 46505702 (-)
ENSDARG00000093413	edil3a	5: 46658045 ~ 46980651 (-)
ENSDARG00000032976	cmlc1	5: 64167620 ~ 64168415 (-)
ENSDARG00000068036	tmem119b	5: 31872049 ~ 31875645 (-)
ENSDARG00000055647	ftr82	5: 30707133 ~ 30715225 (-)
ENSDARG00000003599	rpl3	3: 29867213 ~ 29871364 (-)
ENSDARG00000054438	fzd2	3: 31621774 ~ 31624213 (+)
ENSDARG00000021924	hsp70.3	3: 26123736 ~ 26127091 (+)
ENSDARG00000038010	rac2	3: 29510818 ~ 29544039 (+)
ENSDARG00000012405	col1a1a	3: 23221047 ~ 23239458 (+)
ENSDARG00000105223	pmp22a	3: 50861176 ~ 50865079 (-)
ENSDARG00000031325	tmed1a	3: 47222096 ~ 47235997 (-)
ENSDARG00000115545	clec19a	3: 31177972 ~ 31188131 (+)
ENSDARG00000059906	sdc4	6: 52663097 ~ 52675630 (-)
ENSDARG00000057633	cxcr4a	6: 12922002 ~ 12923727 (+)
ENSDARG00000002644	rgs5a	6: 35387367 ~ 35439406 (-)
ENSDARG00000002933	gbx2	6: 16031189 ~ 16034286 (+)
ENSDARG00000019181	rpsa	6: 7709662 ~ 7720332 (-)
ENSDARG00000008732	zgc:66479	6: 46736251 ~ 46742455 (-)
ENSDARG00000100446	si:ch211-286o17.1	6: 47424266 ~ 47462413 (+)
ENSDARG00000008030	myl9b	6: 1787160 ~ 1799561 (+)
ENSDARG00000052708	tnni1b	6: 54805136 ~ 54826061 (-)
ENSDARG00000103589	gata6	2: 4207209 ~ 4217887 (+)
ENSDARG00000009014	col11a1b	2: 15389193 ~ 15563194 (-)
ENSDARG00000055996	rps8a	2: 26498446 ~ 26501868 (+)
ENSDARG00000061140	colec12	2: 31382590 ~ 31435158 (+)
ENSDARG00000007320	rpl7	2: 30177476 ~ 30182353 (-)
ENSDARG00000020031	cldn11a	2: 25997426 ~ 26001173 (-)
ENSDARG00000033971	prrx1a	2: 23165250 ~ 23172708 (-)
ENSDARG00000040045	cldn1	2: 68789 ~ 71801 (+)
ENSDARG00000079302	and2	2: 31762852 ~ 31767827 (-)
ENSDARG00000006526	fn1b	1: 5504128 ~ 5543065 (-)
ENSDARG00000041394	dnajb1b	1: 55745878 ~ 55750208 (-)
ENSDARG00000078659	tmem176	1: 44935442 ~ 44940953 (-)
ENSDARG00000019778	rps6	1: 45043767 ~ 45049603 (-)
ENSDARG00000055439	adamtsl7	1: 21576674 ~ 21599219 (-)
ENSDARG00000017174	dlx2b	1: 30977936 ~ 30979707 (-)
ENSDARG00000099880	sp6	1: 59533317 ~ 59539898 (+)
ENSDARG00000092693	tpt1	1: 34707932 ~ 34713868 (-)
ENSDARG00000008305	hand2	1: 38193147 ~ 38195012 (-)
ENSDARG00000028213	ttn.2	9: 42894845 ~ 43073960 (-)
ENSDARG00000057859	hoxd10a	9: 1967707 ~ 1970071 (-)
ENSDARG00000059256	hoxd13a	9: 1986816 ~ 1990323 (-)
ENSDARG00000059263	hoxd12a	9: 1981882 ~ 1986014 (-)
ENSDARG00000056087	ecrg4a	9: 6371919 ~ 6380653 (-)
ENSDARG00000014867	rpl8	9: 33323104 ~ 33329787 (-)
ENSDARG00000079071	jam2b	9: 34996245 ~ 35010396 (+)
ENSDARG00000039576	fstl1b	9: 9735493 ~ 9842149 (-)
ENSDARG00000029533	rpl18	16: 16969086 ~ 16991808 (+)
ENSDARG00000093760	si:ch211-197h24.9	16: 27603739 ~ 27609172 (+)
ENSDARG00000005762	col14a1a	16: 14684916 ~ 15050842 (+)
ENSDARG00000007009	hoxa11b	16: 20904754 ~ 20907378 (+)
ENSDARG00000040944	ntd5	16: 13568697 ~ 13595027 (-)
ENSDARG00000040295	apoeb	16: 23960744 ~ 23963461 (+)
ENSDARG00000092170	apoc1	16: 23972126 ~ 23973721 (+)
ENSDARG00000040251	ctsk	16: 29492749 ~ 29502787 (+)
ENSDARG00000059933	plpp3	20: 7964356 ~ 8024582 (-)
ENSDARG00000043531	jun	20: 15552657 ~ 15554606 (+)
ENSDARG00000052336	ociad2	20: 23238833 ~ 23244193 (+)
ENSDARG00000024746	hsp90aa1.2	20: 53967350 ~ 53981626 (-)
ENSDARG00000021789	myoc	20: 15015557 ~ 15021628 (+)
ENSDARG00000042905	rpl10a	8: 23738122 ~ 23742985 (+)
ENSDARG00000019096	myl7	8: 40457107 ~ 40464935 (-)
ENSDARG00000027582	angptl7	8: 46217861 ~ 46221296 (+)
ENSDARG00000078322	col12a1a	17: 49785495 ~ 49978986 (-)
ENSDARG00000037995	gdf3	17: 4239437 ~ 4252221 (-)
ENSDARG00000097478	qkia	17: 27723490 ~ 27814135 (+)
ENSDARG00000018004	nkx2.5	14: 24241241 ~ 24244034 (+)
ENSDARG00000006456	pdgfrl	14: 30359124 ~ 30366196 (-)
ENSDARG00000004402	elovl6	14: 36231126 ~ 36268710 (+)
ENSDARG00000019353	sparc	14: 25937948 ~ 25956860 (-)
ENSDARG00000092199	si:ch211-250c4.4	13: 8168712 ~ 8229977 (-)
ENSDARG00000037116	cxcl12a	13: 30804367 ~ 30819715 (+)
ENSDARG00000057210	has3	18: 17027874 ~ 17030870 (-)
ENSDARG00000026611	socs3b	12: 34258139 ~ 34277465 (+)
ENSDARG00000021864	rplp1	19: 1852078 ~ 1855368 (-)
ENSDARG00000030402	twist1a	19: 2229162 ~ 2231188 (-)
ENSDARG00000020007	col1a2	19: 40983221 ~ 41002980 (+)
ENSDARG00000012060	thbs3b	19: 24419693 ~ 24443867 (-)
ENSDARG00000076126	actc1a	19: 47549568 ~ 47555956 (-)
ENSDARG00000043509	rpl11	19: 43780970 ~ 43786940 (+)
ENSDARG00000019949	serpinh1b	15: 29382454 ~ 29388012 (-)
ENSDARG00000103720	zgc:162730	15: 13984879 ~ 13986761 (+)
ENSDARG00000020610	tnnt2a	23: 5653224 ~ 5685172 (-)
ENSDARG00000058358	krt8	23: 10249626 ~ 10254288 (-)
ENSDARG00000070353	hoxc13a	23: 36052944 ~ 36055886 (+)
ENSDARG00000017821	gata5	23: 7379728 ~ 7391028 (+)
ENSDARG00000062129	mxra8b	23: 29889089 ~ 29906163 (+)
ENSDARG00000012593	col5a1	21: 6556635 ~ 6725780 (+)
ENSDARG00000069048	serpinf1	21: 40106448 ~ 40120169 (+)
ENSDARG00000013430	bhmt	21: 40408 ~ 45920 (-)
ENSDARG00000062171	olfml3b	11: 24671676 ~ 24681292 (-)
ENSDARG00000044895	fmoda	11: 21025895 ~ 21031773 (-)
ENSDARG00000074908	col6a1	11: 33996526 ~ 34065718 (-)
ENSDARG00000034808	kcnip1b	10: 22003750 ~ 22031921 (+)
ENSDARG00000076856	frem2a	10: 25982212 ~ 26116636 (+)
ENSDARG00000056920	tmem88a	10: 22771176 ~ 22780157 (+)
ENSDARG00000056913	pcolcea	10: 22789319 ~ 22803854 (-)
ENSDARG00000068516	hapln1b	10: 43269918 ~ 43334999 (-)
ENSDARG00000035095	tdgf1	10: 1955475 ~ 1961930 (-)
ENSDARG00000027088	ptgdsb.1	24: 17027310 ~ 17029374 (-)
ENSDARG00000089645	si:ch1073-406l10.2	24: 33288455 ~ 33291784 (-)
ENSDARG00000058005	hgd	24: 23959107 ~ 23975132 (+)
ENSDARG00000094422	si:dkey-12l12.1	24: 11334733 ~ 11346871 (+)
ENSDARG00000058730	rdh10a	24: 13251480 ~ 13272843 (-)
ENSDARG00000088514	and1	24: 26277390 ~ 26283359 (-)
ENSDARG00000113572	si:dkey-102c8.3	22: 10090673 ~ 10097227 (+)
ENSDARG00000015273	alpi.1	22: 38762693 ~ 38779462 (+)
ENSDARG00000023963	tpm4a	22: 15577827 ~ 15602760 (-)
ENSDARG00000002192	aspn	22: 10479965 ~ 10487490 (-)
ENSDARG00000095147	krt96	22: 11775269 ~ 11779560 (+)
ENSDARG00000055592	capn2b	22: 26328063 ~ 26353916 (-)
ENSDARG00000059367	mfap2	22: 22888 ~ 24275 (+)
ENSDARG00000090612	FO904898.3	22: 6843363 ~ 6854956 (+)
ENSDARG00000062781	glsl	25: 19485198 ~ 19521245 (+)
ENSDARG00000038288	cd151	25: 3809733 ~ 3830272 (-)
ENSDARG00000045930	rbpms2a	25: 6122823 ~ 6153077 (+)
ENSDARG00000039949	fibina	25: 35502552 ~ 35503409 (+)
--	cpn1.2	--
--	krt18	--
--	cyr61	--
--	hoxc10a.1	--
--	ogn	--
--	wnt11r	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Pectoral fin.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158142 (16hpf)	Danio rerio	head	11	Pectoral fin	baseline	16hpf, 14 somites, untreatment	ENSDARG00000035095 (tdgf1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (16hpf)	Danio rerio	head	11	Pectoral fin	baseline	16hpf, 14 somites, untreatment	ENSDARG00000079578 (rbpms2b)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (20hpf)	Danio rerio	head	9	Pectoral fin	baseline	20hpf, 21-22 somites, untreatment	ENSDARG00000038288 (cd151)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (20hpf)	Danio rerio	head	9	Pectoral fin	baseline	20hpf, 21-22 somites, untreatment	ENSDARG00000056913 (pcolcea)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	11	Pectoral fin	baseline	24hpf, untreatment	ENSDARG00000056087 (ecrg4a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	11	Pectoral fin	baseline	24hpf, untreatment	ENSDARG00000102178 (emilin2b)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	11	Pectoral fin	baseline	24hpf, untreatment	ENSDARG00000088514 (and1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	11	Pectoral fin	baseline	24hpf, untreatment	ENSDARG00000079302 (and2)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	11	Pectoral fin	baseline	24hpf, untreatment	-- (ogn)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	11	Pectoral fin	baseline	24hpf, untreatment	ENSDARG00000103515 (vcana)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	2	Pectoral fin	baseline	3dpf, untreatment	ENSDARG00000105223 (pmp22a)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

CELL TYPE: Pectoral fin

Distribution of Pectoral fin in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences