Fish Single-cell RNA Database

GENE ID: ENSDARG00000101109

Symbol	Location	Gene type	Genome version	Species
cldn15b	5: 53908609 ~ 53955218 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000101109 (cldn15b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000036376	cldn7a	7: 22616212 ~ 22626853 (+)
ENSDARG00000112049	cldn15a	7: 20826240 ~ 20836625 (-)
ENSDARG00000101109	cldn15b	5: 53908609 ~ 53955218 (-)
ENSDARG00000020031	cldn11a	2: 25997426 ~ 26001173 (-)
ENSDARG00000003927	cldn12	16: 43227724 ~ 43233509 (-)
ENSDARG00000032049	enah	20: 36419947 ~ 36617313 (-)
ENSDARG00000071592	aqp8a.2	12: 20354691 ~ 20362061 (-)
ENSDARG00000058880	cldnj	15: 2631421 ~ 2632891 (-)
ENSDARG00000043133	cldnf	15: 2650787 ~ 2652640 (-)
ENSDARG00000069888	cldna	15: 2655566 ~ 2657508 (-)
ENSDARG00000015955	cldnc	21: 25754268 ~ 25756119 (-)
ENSDARG00000009544	cldnb	21: 25765734 ~ 25766840 (+)
ENSDARG00000044387	cldn2	21: 38002879 ~ 38009507 (+)
ENSDARG00000014047	cldn7b	10: 22144768 ~ 22150419 (-)
ENSDARG00000030723	cldn11b	24: 26432541 ~ 26441318 (+)
--	cldn20	--

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells	NA	NA	NA
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE158142 (16hpf)	head	baseline	16hpf, 14 somites, untreatment	NA	NA	NA
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment	NA	NA	NA
GSE158142 (24hpf)	head	baseline	24hpf, untreatment	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000101109

EXPRESSION

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