GENE ID: ENSDARG00000104213

Symbol Location Gene type Genome version Species
si:dkey-283b1.6 3: 33389023 ~ 33395233 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epithelial cells (cluster: 15)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Intesinal epithelial cells (cluster: 17)
 potential marker
 NA
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Enterocytes (cluster: 4)
 potential marker
 NA
GSE150498 (DSS treated) intestine disease 6dpf, DSS treated Enterocytes (cluster: 2)
 potential marker
 NA
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
GSE158142 (2dpf) head baseline 2dpf, untreatment
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
GSE158142 (3dpf) head baseline 3dpf, untreatment
GSE158142 (24hpf) head baseline 24hpf, untreatment
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT

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