Symbol | Location | Gene type | Genome version | Species |
---|---|---|---|---|
ptger1a | 6: 8393378 ~ 8407406 (-) | protein_coding | GRCz11 | Danio rerio |
8,386,000
8,388,000
8,390,000
8,392,000
8,394,000
8,396,000
8,398,000
8,400,000
8,402,000
8,404,000
8,406,000
8,408,000
8,410,000
8,412,000
8,414,000
8,416,000
6
Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
---|---|---|---|---|---|---|---|
PRJNA554650 (6.5dpf) | brain | baseline | 6.5dpf, whole brain of nr1d1:VNP fish | NA | NA | NA | |
PRJNA415636 (brain) | brain | baseline | adult, Zebrabow M, brain | NA | NA | NA | |
GSE144944 (fgfr3 +|+) | cranial vault | baseline | 1mpf, fgfr3 +/+ | NA | NA | NA | |
GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | NA | NA | NA | |
GSE130526 (fin) | dorsal and anal fin | baseline | adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry | NA | NA | NA | |
PRJNA734348 (dome, control) | embryo | baseline | 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) | NA | NA | NA | |
PRJNA734348 (dome, dnmt1) | embryo | growth | 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) | NA | NA | NA | |
PRJNA734348 (shield, control) | embryo | baseline | 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) | NA | NA | NA | |
PRJNA734348 (shield, dnmt1) | embryo | growth | 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) | NA | NA | NA | |
GSE168695 (5dpf) | embryo | baseline | 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos | NA | NA | NA | |
PRJNA564810 (5dpf) | embryo | baseline | 5dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
PRJNA564810 (2dpf) | embryo | baseline | 2dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
PRJNA564810 (1dpf) | embryo | baseline | 1dpf, a single-cell transcriptome atlas for zebrafish development | NA | NA | NA | |
GSE158142 (3dpf) | head | baseline | 3dpf, untreatment | NA | NA | NA | |
PRJNA608912 (wt_unjuried) | heart | baseline | 5mpf, wild type, uninjured | NA | NA | NA | |
PRJNA608912 (kit_uninjuried) | heart | regeneration | 5mpf, kit mutant, uninjured | NA | NA | NA | |
PRJNA608912 (kit_2dpi) | heart | regeneration | 5mpf, kit mutant, 2 days post injury | NA | NA | NA | |
PRJNA754013 (zebrafish) | hypothalamus | baseline | adult, male, female, untreatment | NA | NA | NA | |
PRJNA605021 (supporting cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae | NA | NA | NA | |
PRJNA605021 (hair cells) | neuromast | baseline | 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae | NA | NA | NA | |
PRJNA668529 (3d) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 days | NA | NA | NA | |
PRJNA668529 (3h) | olfactory rosette | disease | 3mpf, intranasal 100ng r-Spike 3 hours | NA | NA | NA | |
PRJNA668529 (control) | olfactory rosette | baseline | 3mpf, intranasal PBS | NA | NA | NA | |
GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis | NA | NA | NA | |
GSE175929 (5mpf) | retina | baseline | 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg | NA | NA | NA | |
PRJNA551501 (2mpf) | thyroid gland | baseline | 2mpf, Tg(tg:mVenus-T2A-NTR) | NA | NA | NA | |
PRJNA551501 (8mpf) | thyroid gland | baseline | 8mpf, Tg(tg:mVenus-T2A-NTR) | NA | NA | NA | |
GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment | NA | NA | NA | |
GSE163907 (24hpf) | trunk | baseline | 24hpf, trunk tg(sox10:GFP) positive cells | NA | NA | NA | |
GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone | NA | NA | NA | |
GSE176129 (pdgfrb-positive) | whole body | baseline | 5dpf, FACS-isolated pdgfrb-positive cells | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 2.5dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 6dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 6dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 10dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE158099 (WT) | whole body | baseline | 16dpf, cd41:GFPlow-WT | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA | |
GSE158099 (runx1 -|-) | whole body | hematopoietic | 16dpf, cd41:GFPlow-runx1-/- | NA | NA | NA |