Fish Single-cell RNA Database

GENE ID: ENSDARG00000058145

Symbol	Location	Gene type	Genome version	Species
atp7b	6: 10094061 ~ 10132102 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
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PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000058145 (atp7b), yellow represents other genes.

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The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000000423	si:ch73-314g15.3	7: 32629674 ~ 32645200 (+)
ENSDARG00000092003	ccs	7: 6990510 ~ 7011961 (+)
ENSDARG00000013961	slc31a1	5: 57328535 ~ 57354915 (+)
ENSDARG00000051921	slc30a5	5: 54716670 ~ 54729578 (-)
ENSDARG00000052437	mia	5: 57653459 ~ 57655092 (-)
ENSDARG00000029931	atp13a1	3: 52899801 ~ 52952026 (+)
ENSDARG00000067593	sco1	3: 62196672 ~ 62203711 (+)
ENSDARG00000007098	itm2ba	6: 10015525 ~ 10026858 (-)
ENSDARG00000058145	atp7b	6: 10094061 ~ 10132102 (+)
ENSDARG00000031203	commd1	1: 53490669 ~ 53504603 (-)
ENSDARG00000027572	as3mt	1: 31706668 ~ 31722875 (+)
ENSDARG00000102898	mtf1	16: 4132537 ~ 4168888 (+)
ENSDARG00000030038	NA	20: 14458930 ~ 14463012 (-)
ENSDARG00000021305	slc30a2	20: 38595935 ~ 38617766 (-)
ENSDARG00000053896	slc30a1b	17: 37215820 ~ 37221044 (+)
ENSDARG00000097530	xkr5b	17: 32608010 ~ 32621103 (-)
ENSDARG00000057272	slc30a9	14: 44804326 ~ 44826422 (+)
ENSDARG00000036442	atp11c	14: 32507811 ~ 32631519 (-)
ENSDARG00000087693	atox1	14: 25982962 ~ 25985762 (-)
ENSDARG00000054584	FO681288.1	18: 48943875 ~ 48953002 (+)
ENSDARG00000061004	cox11	12: 32068294 ~ 32073619 (-)
ENSDARG00000028012	tpmt.2	19: 47299166 ~ 47309383 (+)
ENSDARG00000059231	hephl1a	15: 2421432 ~ 2472933 (+)
ENSDARG00000060980	atp8b1	21: 3618519 ~ 3700334 (-)
ENSDARG00000076092	slc31a2	21: 13785969 ~ 13796940 (+)
ENSDARG00000028106	glrx	21: 11776328 ~ 11782093 (+)
ENSDARG00000024295	slc11a2	11: 281833 ~ 287670 (-)
ENSDARG00000076622	atp13a3	11: 34116734 ~ 34188346 (-)
ENSDARG00000010312	cp	22: 38173960 ~ 38199988 (+)
ENSDARG00000052122	rag1	25: 9003230 ~ 9009902 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	NA	NA	NA
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE158142 (3dpf)	head	baseline	3dpf, untreatment	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl	NA	NA	NA
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated	NA	NA	NA
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS	NA	NA	NA
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
GSE137784 (HCC, HepABC)	liver	disease	6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC	NA	NA	NA
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC	NA	NA	NA
GSE137784 (no HCC)	liver	baseline	6mpf, male, isolated from the CreLox zebrafish with HCC	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2	NA	NA	NA
GSE148591 (3mpf)	pituitary	transplant	3mpf, graft transplantation during early embryogenesis	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	NA	NA	NA
PRJNA641144 (P_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo primary tumors	NA	NA	NA
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases	NA	NA	NA
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases	NA	NA	NA
PRJNA641144 (D_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro individual culture	NA	NA	NA
PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000058145

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences