Fish Single-cell RNA Database

GENE ID: ENSDARG00000005050

Symbol	Location	Gene type	Genome version	Species
wnt2ba	6: 48253449 ~ 48271687 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000005050 (wnt2ba), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000005541	wif1	4: 12931763 ~ 12956718 (+)
ENSDARG00000100143	lrp6	4: 90048 ~ 100007 (+)
ENSDARG00000035185	fzd9a	5: 56023186 ~ 56027776 (+)
ENSDARG00000035521	sfrp1a	5: 27488975 ~ 27538745 (+)
ENSDARG00000054438	fzd2	3: 31621774 ~ 31624213 (+)
ENSDARG00000031126	notum1a	3: 57948377 ~ 57979190 (+)
ENSDARG00000088411	notum2	6: 10943188 ~ 10964083 (-)
ENSDARG00000027589	fzd7b	6: 9703721 ~ 9707599 (-)
ENSDARG00000007231	ryk	6: 27514465 ~ 27615701 (+)
ENSDARG00000005050	wnt2ba	6: 48253449 ~ 48271687 (+)
ENSDARG00000032603	st7l	6: 48290125 ~ 48317562 (-)
ENSDARG00000036471	dand5	1: 51827046 ~ 51829291 (+)
ENSDARG00000070050	sfrp2	1: 25491324 ~ 25496133 (-)
ENSDARG00000025420	fzd5	9: 28232522 ~ 28234444 (+)
ENSDARG00000018383	frzb	9: 44832032 ~ 44839148 (+)
ENSDARG00000060004	fzd7a	9: 13352308 ~ 13355071 (-)
ENSDARG00000106062	fzd1	16: 53917415 ~ 53919115 (-)
ENSDARG00000104874	fzd6	16: 54513267 ~ 54521652 (+)
ENSDARG00000021664	fzd3a	20: 35208855 ~ 35246150 (-)
ENSDARG00000068213	fzd10	8: 44295983 ~ 44298964 (-)
ENSDARG00000052455	porcnl	8: 22544290 ~ 22558773 (-)
ENSDARG00000014103	dkk1a	13: 41022502 ~ 41026398 (+)
ENSDARG00000039041	sfrp5	13: 39911551 ~ 39947335 (-)
ENSDARG00000014673	fzd9b	18: 41648812 ~ 41650648 (-)
ENSDARG00000089563	sfrp2l	15: 47811725 ~ 47822597 (-)
ENSDARG00000076227	ror2	10: 5268054 ~ 5407509 (+)
ENSDARG00000057678	sfrp1b	10: 20351413 ~ 20357013 (-)
ENSDARG00000104117	fzd4	KN150617.1: 66381 ~ 79211 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Smooth muscle cells (cluster: 11)	potential marker	NA
PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
GSE158142 (18hpf)	head	baseline	18hpf, 18 somites, untreatment
GSE158142 (1.5dpf)	head	baseline	1.5dpf, untreatment
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver
GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
GSE150498 (wildtype, untreated)	intestine	baseline	6dpf, wildtype, untreated
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS
GSE150498 (nod2-\|-, 1X DSS)	intestine	disease	6dpf, nod2-/-, 1X DSS
GSE150498 (wildtype, 2X DSS)	intestine	disease	6dpf, wildtype, 2X DSS
GSE150498 (wildtype, 2X DSS+BZA)	intestine	disease	6dpf, wildtype, 2X DSS+BZA
GSE150498 (nod2-\|-, 2X DSS)	intestine	disease	6dpf, nod2-/-, 2X DSS
GSE137784 (HCC, CreLox)	liver	disease	6mpf, male, isolated from the zebrafish without HCC
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	6dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	10dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

GENE ID: ENSDARG00000005050

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences